Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04058 and BSU27940

See Amino acid alignment / Visit BSNT_04058 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence dna-align/BSNT_04058___rpmA.1.22522.seq
#    -bsequence dna-align/BSU27940___rpmA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04058___rpmA-BSU27940___rpmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04058___rpmA-BSU27940___rpmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04058___rpmA
# 2: BSU27940___rpmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     285/285 (100.0%)
# Similarity:   285/285 (100.0%)
# Gaps:           0/285 ( 0.0%)
# Score: 1425.0
# 
#
#=======================================

BSNT_04058___      1 ATGCTTAGATTAGATCTTCAGTTTTTCGCTTCTAAAAAAGGAGTAGGTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27940___rp      1 ATGCTTAGATTAGATCTTCAGTTTTTCGCTTCTAAAAAAGGAGTAGGTTC     50

BSNT_04058___     51 TACAAAGAACGGACGTGACTCTGAGGCTAAACGTTTAGGTGCTAAACGTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27940___rp     51 TACAAAGAACGGACGTGACTCTGAGGCTAAACGTTTAGGTGCTAAACGTG    100

BSNT_04058___    101 CTGACGGTCAATTCGTAACAGGCGGTTCTATCCTTTACCGTCAACGCGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27940___rp    101 CTGACGGTCAATTCGTAACAGGCGGTTCTATCCTTTACCGTCAACGCGGA    150

BSNT_04058___    151 ACAAAAATTTACCCAGGTGAAAACGTGGGCCGCGGCGGAGATGACACTCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27940___rp    151 ACAAAAATTTACCCAGGTGAAAACGTGGGCCGCGGCGGAGATGACACTCT    200

BSNT_04058___    201 ATTTGCGAAAATCGACGGAACTGTTAAATTCGAACGTTTCGGCCGTGACC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27940___rp    201 ATTTGCGAAAATCGACGGAACTGTTAAATTCGAACGTTTCGGCCGTGACC    250

BSNT_04058___    251 GCAAAAAAGTGAGCGTATATCCTGTAGCTCAATAA    285
                     |||||||||||||||||||||||||||||||||||
BSU27940___rp    251 GCAAAAAAGTGAGCGTATATCCTGTAGCTCAATAA    285


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