Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04052 and BSU27900

See Amino acid alignment / Visit BSNT_04052 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence dna-align/BSNT_04052___pheA.1.22522.seq
#    -bsequence dna-align/BSU27900___pheA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04052___pheA-BSU27900___pheA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04052___pheA-BSU27900___pheA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04052___pheA
# 2: BSU27900___pheA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     851/858 (99.2%)
# Similarity:   851/858 (99.2%)
# Gaps:           0/858 ( 0.0%)
# Score: 4227.0
# 
#
#=======================================

BSNT_04052___      1 ATGAAAGTCGGTTATTTAGGTCCAGCAGCTACATTTACACATCTAGCAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph      1 ATGAAAGTCGGTTATTTAGGTCCAGCAGCTACATTTACACATCTAGCAGT     50

BSNT_04052___     51 CAGTTCTTGTTTTCAAAACGGCGCCGAACATGTTGCTTACCGCACCATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph     51 CAGTTCTTGTTTTCAAAACGGCGCCGAACATGTTGCTTACCGCACCATTC    100

BSNT_04052___    101 CGGAGTGTATAGATGCAGCCGTTGCAGGCGAAGTTGATTTTGCTTTTGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    101 CGGAGTGTATAGATGCAGCCGTTGCAGGCGAAGTTGATTTTGCTTTTGTT    150

BSNT_04052___    151 CCTTTGGAAAATGCATTAGAAGGATCTGTTAATCTAACAATAGACTATTT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU27900___ph    151 CCTTTGGAAAATGCTTTAGAAGGATCTGTTAATCTAACAATAGACTATTT    200

BSNT_04052___    201 AATACATGAACAGCCCTTGCCAATCGTGGGTGAAATGACGTTGCCGATTC    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27900___ph    201 AATACATGAACAGCCTTTGCCAATCGTGGGTGAAATGACGTTGCCGATTC    250

BSNT_04052___    251 ATCAGCACTTGCTCGTCCATCCCTCTAGAGAGAATGCATGGAAAGAGCTC    300
                     |.|||||||||||||||||||||||.||||||||||||||||||||||||
BSU27900___ph    251 ACCAGCACTTGCTCGTCCATCCCTCAAGAGAGAATGCATGGAAAGAGCTC    300

BSNT_04052___    301 GACAAAATTTACTCACATTCACACGCGATTGCGCAATGCCATAAATTTCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    301 GACAAAATTTACTCACATTCACACGCGATTGCGCAATGCCATAAATTTCT    350

BSNT_04052___    351 TCATCGACATTTTCCTTCCGTTCCATATGAATACGCCAATTCTACCGGGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    351 TCATCGACATTTTCCTTCCGTTCCATATGAATACGCCAATTCTACCGGGG    400

BSNT_04052___    401 CGGCAGCAAAGTTTGTCAGTGACCATCCCGAGCTGAATATCGGGGTCATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    401 CGGCAGCAAAGTTTGTCAGTGACCATCCCGAGCTGAATATCGGGGTCATT    450

BSNT_04052___    451 GCCAATGATATGGCAGCTTCTACATACGAATTAAAAATCGTGAAACGGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    451 GCCAATGATATGGCAGCTTCTACATACGAATTAAAAATCGTGAAACGGGA    500

BSNT_04052___    501 TATACAGGATTATAGGGACAATCATACAAGATTTGTTATCCTGTCTCCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU27900___ph    501 TATACAGGATTATAGGGACAATCATACAAGATTTGTTATCCTGTCTCCCG    550

BSNT_04052___    551 ATGAAAACATATCTTTTGAAGTGAATTCAAAATTGAGTTCTAGGCCCAAA    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27900___ph    551 ATGAAAACATATCTTTTGAAGTGAATTCAAAATTGAGCTCTAGGCCCAAA    600

BSNT_04052___    601 ACGACCTTAATGGTCATGCTGCCGCAGGATGATCAGTCCGGGGCGCTGCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    601 ACGACCTTAATGGTCATGCTGCCGCAGGATGATCAGTCCGGGGCGCTGCA    650

BSNT_04052___    651 TAGAGTGCTGTCTGCATTTTCTTGGAGAAATTTAAACTTGTCAAAAATTG    700
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27900___ph    651 TAGAGTGCTGTCTGCATTTTCTTGGAGAAATTTAAACCTGTCAAAAATTG    700

BSNT_04052___    701 AGTCACGTCCGACTAAAACCGGATTAGGCCATTATTTCTTTATTATTGAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    701 AGTCACGTCCGACTAAAACCGGATTAGGCCATTATTTCTTTATTATTGAT    750

BSNT_04052___    751 ATTGAGAAAGCGTTTGATGATGTATTGATTCCAGGGGCCATGCAGGAGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    751 ATTGAGAAAGCGTTTGATGATGTATTGATTCCAGGGGCCATGCAGGAGCT    800

BSNT_04052___    801 TGAAGCACTCGGCTGCAAAGTGAGGCTTCTGGGTGCATACCAGTCTTACC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27900___ph    801 TGAAGCACTCGGCTGCAAAGTGAGGCTTCTGGGTGCATACCAGTCTTACC    850

BSNT_04052___    851 AATTATAA    858
                     ||||||||
BSU27900___ph    851 AATTATAA    858


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