Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04051 and BSU27890

See Amino acid alignment / Visit BSNT_04051 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence dna-align/BSNT_04051___yrxA.1.22522.seq
#    -bsequence dna-align/BSU27890___nadR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04051___yrxA-BSU27890___nadR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04051___yrxA-BSU27890___nadR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04051___yrxA
# 2: BSU27890___nadR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     542/543 (99.8%)
# Similarity:   542/543 (99.8%)
# Gaps:           0/543 ( 0.0%)
# Score: 2706.0
# 
#
#=======================================

BSNT_04051___      1 TTGACCGAAGAATTAAAGCTAATGGGCGCCAACAGGCGTGACCAGCTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na      1 TTGACCGAAGAATTAAAGCTAATGGGCGCCAACAGGCGTGACCAGCTTCT     50

BSNT_04051___     51 TCTGTGGCTGAAGGAATCTAAATCACCGCTGACAGGAGGAGAACTCGCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na     51 TCTGTGGCTGAAGGAATCTAAATCACCGCTGACAGGAGGAGAACTCGCAA    100

BSNT_04051___    101 AAAAAGCGAACGTCTCAAGACAGGTTATTGTACAGGATATATCGCTCTTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    101 AAAAAGCGAACGTCTCAAGACAGGTTATTGTACAGGATATATCGCTCTTG    150

BSNT_04051___    151 AAAGCGAAAAATGTACCGATTATCGCCACAAGCCAAGGATATGTATACAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    151 AAAGCGAAAAATGTACCGATTATCGCCACAAGCCAAGGATATGTATACAT    200

BSNT_04051___    201 GGATGCAGCCGCTCAGCAGCACCAGCAGGCAGAAAGAATCATAGCATGTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    201 GGATGCAGCCGCTCAGCAGCACCAGCAGGCAGAAAGAATCATAGCATGTC    250

BSNT_04051___    251 TGCACGGTCCTGAACGGACAGAAGAGGAACTGCAGCTCATCGTCGACGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    251 TGCACGGTCCTGAACGGACAGAAGAGGAACTGCAGCTCATCGTCGACGAA    300

BSNT_04051___    301 GGCGTTACAGTAAAAGACGTAAAAATCGAGCATCCCGTATACGGAGATTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    301 GGCGTTACAGTAAAAGACGTAAAAATCGAGCATCCCGTATACGGAGATTT    350

BSNT_04051___    351 AACTGCAGCCATCCAAGTAGGCACCCGGAAAGAAGTTAGCCATTTCATCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    351 AACTGCAGCCATCCAAGTAGGCACCCGGAAAGAAGTTAGCCATTTCATCA    400

BSNT_04051___    401 AAAAAATCAATTCTACGAATGCTGCCTACTTATCACAGCTGACCGACGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    401 AAAAAATCAATTCTACGAATGCTGCCTACTTATCACAGCTGACCGACGGC    450

BSNT_04051___    451 GTGCACCTGCATACACTGACAGCACCTGATGAACATCGCATCGATCAAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    451 GTGCACCTGCATACACTGACAGCACCTGATGAACATCGCATCGATCAAGC    500

BSNT_04051___    501 TTGCCAAGCCCTCGAAGAAGCCGGCATTTTAATTAAAGACTAA    543
                     .||||||||||||||||||||||||||||||||||||||||||
BSU27890___na    501 CTGCCAAGCCCTCGAAGAAGCCGGCATTTTAATTAAAGACTAA    543


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