Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04050 and BSU27880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_04050___nifS.1.22522.seq
# -bsequence dna-align/BSU27880___nifS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04050___nifS-BSU27880___nifS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04050___nifS-BSU27880___nifS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04050___nifS
# 2: BSU27880___nifS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1203
# Identity: 1182/1203 (98.3%)
# Similarity: 1182/1203 (98.3%)
# Gaps: 15/1203 ( 1.2%)
# Score: 5886.0
#
#
#=======================================
BSNT_04050___ 1 ATGGAGGAAGACCGGATGATTTATTTAGATTATGCAGCGACAACGCCTAT 50
|||||||||||||||||||||||||||||||||||
BSU27880___ni 1 ---------------ATGATTTATTTAGATTATGCAGCGACAACGCCTAT 35
BSNT_04050___ 51 TTGTGAGGAAGCCCTTACTGTATATCAGAAGCTTAGTATGGATATGTACG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 36 TTGTGAGGAAGCCCTTACTGTATATCAGAAGCTTAGTATGGATATGTACG 85
BSNT_04050___ 101 GAAATGCCAGCAGCCTGCATGATGCAGGAGGAAAAGCAAAGCACATACTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 86 GAAATGCCAGCAGCCTGCATGATGCAGGAGGAAAAGCAAAGCACATACTG 135
BSNT_04050___ 151 GAGTACTGCCGTGAAAAAATCGCCAACATCATTGGCGGAGAAGCAAGCGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 136 GAGTACTGCCGTGAAAAAATCGCCAACATCATTGGCGGAGAAGCAAGCGG 185
BSNT_04050___ 201 CATCTATTTTACAAGCGGCGGCACTGAATCCAATTTTCTGGCCATTCAAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 186 CATCTATTTTACAAGCGGCGGCACTGAATCCAATTTTCTGGCCATTCAAT 235
BSNT_04050___ 251 CATTGCTAAACGGCCTGCCAAAAACGAAAAGACATTTTATTATGACTGCC 300
|||||.||||||||||||||||||||||||||||||||||||.|||||||
BSU27880___ni 236 CATTGTTAAACGGCCTGCCAAAAACGAAAAGACATTTTATTACGACTGCC 285
BSNT_04050___ 301 ATGGAGCATCAGTCCATTCATAATTGCGCTGCTTTTTTGGAACAGCAGGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 286 ATGGAGCATCAGTCCATTCATAATTGCGCTGCTTTTTTGGAACAGCAGGG 335
BSNT_04050___ 351 ATATGATGTAACAGTCATTGAACCGAATGAATACGGGCTTATTACCGAGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 336 ATATGATGTAACAGTCATTGAACCGAATGAATACGGGCTTATTACCGAGG 385
BSNT_04050___ 401 AAATATTACTAGCCCATATCCGGCCGGAAACAGGCCTTGTATCTATTCAG 450
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU27880___ni 386 AAATATTACTAACCCATATCCGGCCGGAAACAGGCCTTGTATCTATTCAG 435
BSNT_04050___ 451 CATGCAAATTCTGAAACCGGGATCATTCAGCCCATTCAACGCCTGTCTTC 500
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU27880___ni 436 CATGCAAATTCTGAAACCGGGATCATTCAGCCCATTCAACACCTGTCTTC 485
BSNT_04050___ 501 ATACCTGCACAATAAGGGGATTCTTCTTCATTGCGACGCTGTTCAAACGT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 486 ATACCTGCACAATAAGGGGATTCTTCTTCATTGCGACGCTGTTCAAACGT 535
BSNT_04050___ 551 TTGGAAAGATCCCGATCAATACAAAAAATCTGGGAGTAGATGCACTCTCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 536 TTGGAAAGATCCCGATCAATACAAAAAATCTGGGAGTAGATGCACTCTCA 585
BSNT_04050___ 601 ATGTCCAGCCATAAAATCCACGGTCCAAAAGGAGTAGGGGCGGTCTATAT 650
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU27880___ni 586 ATGTCCAGCCATAAAATCCACGGTCCTAAAGGAGTAGGGGCGGTCTATAT 635
BSNT_04050___ 651 CCGGCCGGATGTCCCTTGGAAACCCGTTTATCATCTGACTACTCACGAAT 700
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU27880___ni 636 CCGGCCGGATGTCCCTTGGAAACCCGTTTATCCTCTGACTACTCACGAAT 685
BSNT_04050___ 701 ACGGATTCAGAGCCGGCACCGTAAATGTTCCCGGGATCGGTGCCTTCACT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 686 ACGGATTCAGAGCCGGCACCGTAAATGTTCCCGGGATCGGTGCCTTCACT 735
BSNT_04050___ 751 GCCGCTGCAGAATTGATCGTAAGCGAAATGGAAAAACAGATATCCCGCAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 736 GCCGCTGCAGAATTGATCGTAAGCGAAATGGAAAAACAGATATCCCGCAA 785
BSNT_04050___ 801 TGAGGCATTAAGAACATACTTTCTAGACCAAATCCGTATTCGGTCTCTCC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 786 TGAGGCATTAAGAACATACTTTCTAGACCAAATCCGTATTCGGTCTCTCC 835
BSNT_04050___ 851 CTGTAACCCTTGCAGCAGACACTTCGAAAGCAGAATGTCTTCCGCATATT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 836 CTGTAACCCTTGCAGCAGACACTTCGAAAGCAGAATGTCTTCCGCATATT 885
BSNT_04050___ 901 ATAGGGTGTTTTTTTCACTCATTTGAAGGACAATATGTTATGTTAGAATG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 886 ATAGGGTGTTTTTTTCACTCATTTGAAGGACAATATGTTATGTTAGAATG 935
BSNT_04050___ 951 TAATCGGAGTAATATTTGCATTTCAACCGGCAGCGCTTGTTCTGCAGGTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 936 TAATCGGAGTAATATTTGCATTTCAACCGGCAGCGCTTGTTCTGCAGGTT 985
BSNT_04050___ 1001 ACCACGGTCCGTCTGAAACAATGAAAGCATTAAGAAAAACCGAACAAGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 986 ACCACGGTCCGTCTGAAACAATGAAAGCATTAAGAAAAACCGAACAAGAA 1035
BSNT_04050___ 1051 GCTCTGCAATTTATCCGCATCTCTTTTGGCAGGCATACAACAGCTGAACA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 1036 GCTCTGCAATTTATCCGCATCTCTTTTGGCAGGCATACAACAGCTGAACA 1085
BSNT_04050___ 1101 GCTGGAACAGTTATTACATACGTTTACAGTGCTTTGGGAACAAAAGAAAG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 1086 GCTGGAACAGTTATTACATACGTTTACAGTGCTTTGGGAACAAAAGAAAG 1135
BSNT_04050___ 1151 GAGAATTTGATATTGACCGAAGAATTAAAGCTAATGGGCGCCAACAGGCG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni 1136 GAGAATTTGATATTGACCGAAGAATTAAAGCTAATGGGCGCCAACAGGCG 1185
BSNT_04050___ 1201 TGA 1203
|||
BSU27880___ni 1186 TGA 1188
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