Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04044 and BSU27840

See Amino acid alignment / Visit BSNT_04044 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence dna-align/BSNT_04044___safA.1.22522.seq
#    -bsequence dna-align/BSU27840___safA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04044___safA-BSU27840___safA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04044___safA-BSU27840___safA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04044___safA
# 2: BSU27840___safA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1164
# Identity:    1158/1164 (99.5%)
# Similarity:  1158/1164 (99.5%)
# Gaps:           0/1164 ( 0.0%)
# Score: 5766.0
# 
#
#=======================================

BSNT_04044___      1 TTGAAAATCCATATCGTTCAAAAAGGTGATTCGCTCTGGAAAATAGCTGA     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU27840___sa      1 TTGAAAATCCATATCGTTCAAAAAGGCGATTCGCTCTGGAAAATAGCTGA     50

BSNT_04044___     51 AAAGTACGGAGTCGATGTTGAGGAAGTGAAAAAACTCAATACACAGCTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa     51 AAAGTACGGAGTCGATGTTGAGGAAGTGAAAAAACTCAATACACAGCTTA    100

BSNT_04044___    101 GCAATCCAGACTTAATCATGCCTGGAATGAAAATAAAAGTGCCGTCAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    101 GCAATCCAGACTTAATCATGCCTGGAATGAAAATAAAAGTGCCGTCAGAA    150

BSNT_04044___    151 GGAGTCCCGGTCAGAAAAGAGCCAAAAGCGGGCAAAAGTCCTGCGGCCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    151 GGAGTCCCGGTCAGAAAAGAGCCAAAAGCGGGCAAAAGTCCTGCGGCCGG    200

BSNT_04044___    201 GAGTGTGAAGCAAGAACATCCATATGCGAAAGAGAAGCCTAAATCCGTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    201 GAGTGTGAAGCAAGAACATCCATATGCGAAAGAGAAGCCTAAATCCGTTG    250

BSNT_04044___    251 TCGATGTAGAAGACACAAAGCCGAAAGAAAAGAAGTCCATGCCGTATGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    251 TCGATGTAGAAGACACAAAGCCGAAAGAAAAGAAGTCCATGCCGTATGTC    300

BSNT_04044___    301 CCGCCGATGCCTAATTTGCAGGAAAATGTGTACCCTGAAGCTGATGTGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    301 CCGCCGATGCCTAATTTGCAGGAAAATGTGTACCCTGAAGCTGATGTGAA    350

BSNT_04044___    351 CGATTATTATGATATGAAACAGCTTTTCCAGCCTTGGTCGCCTCCTAAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    351 CGATTATTATGATATGAAACAGCTTTTCCAGCCTTGGTCGCCTCCTAAAC    400

BSNT_04044___    401 CGGAGGAGCCGAAAAAACATCATGACGGAAATATGGATCATATGTATCAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    401 CGGAGGAGCCGAAAAAACATCATGACGGAAATATGGATCATATGTATCAT    450

BSNT_04044___    451 ATGCAAGACCAATTTCCACAACAGGAGGCTATGAGTAATATGGAAAATGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    451 ATGCAAGACCAATTTCCACAACAGGAGGCTATGAGTAATATGGAAAATGC    500

BSNT_04044___    501 AAATTATCCGAATATGCCTAATATGCCAAAGGCGCCAGAGGTAGGCGGTG    550
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU27840___sa    501 AAATTATCCGAATATGCCTAATATGCCAAAGGCGCCAGAGGTAGGCGGTA    550

BSNT_04044___    551 TAGAAGAGGAAAACGTTCATCACACAGTTCCGAATATGCCGATGCCGGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    551 TAGAAGAGGAAAACGTTCATCACACAGTTCCGAATATGCCGATGCCGGCT    600

BSNT_04044___    601 GTTCAGCCTTATTATCATTATCCGGCTCATTTCGTACCGTGTCCGGTGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    601 GTTCAGCCTTATTATCATTATCCGGCTCATTTCGTACCGTGTCCGGTGCC    650

BSNT_04044___    651 TGTTTCGCCAATTTTTCCAGGATCAGGATTATGCTATCCGTACTATCCGG    700
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU27840___sa    651 TGTTTCGCCAATTCTTCCAGGATCAGGATTATGCTATCCGTACTATCCGG    700

BSNT_04044___    701 CACAAGCTTATCCAATGCATCCGATGCATGGATACCAGCCAGGCTTTGTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    701 CACAAGCTTATCCAATGCATCCGATGCATGGATACCAGCCAGGCTTTGTA    750

BSNT_04044___    751 TCGCCTCAGTATGACCCGGGTTATGAAAACCAGCATCATGAAAACAGCCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    751 TCGCCTCAGTATGACCCGGGTTATGAAAACCAGCATCATGAAAACAGCCA    800

BSNT_04044___    801 TCACGGACATTACGGTTCATACGGTGCGCCGCAATACGCATCTCCGGCTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    801 TCACGGACATTACGGTTCATACGGTGCGCCGCAATACGCATCTCCGGCTT    850

BSNT_04044___    851 ATGGATCTCCGTATGGACATATGCCGTATGGCCCTTATTACGGCACTCCC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    851 ATGGATCTCCGTATGGACATATGCCGTATGGCCCTTATTACGGCACTCCC    900

BSNT_04044___    901 CAAGTAATGGGAGCATACCAGCCTGCTGCGGCTCATGGTTACATGCCATA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    901 CAAGTAATGGGAGCATACCAGCCTGCTGCGGCTCATGGTTACATGCCATA    950

BSNT_04044___    951 CAAAGATCATGACGACTGCGGCTGTGACGGTGATCATCAGCCATATTTCT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa    951 CAAAGATCATGACGACTGCGGCTGTGACGGTGATCATCAGCCATATTTCT   1000

BSNT_04044___   1001 CTGCGCCTGGCCATTCGGGAATGGGAGCTTATGGAAGCCCTAATATGCCA   1050
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa   1001 CTGCACCTGGCCATTCGGGAATGGGAGCTTATGGAAGCCCTAATATGCCA   1050

BSNT_04044___   1051 TATGGCACAGCTAACCCAAATCCAAACCCATATTCGGCAGGAGTTTCTAT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27840___sa   1051 TATGGCACAGCTAACCCAAATCCAAACCCATATTCGGCAGGAGTTTCTAT   1100

BSNT_04044___   1101 GCCAATGACGAATCAGCCTTCTGTAAACCAAATGTTTGGCCGGCCGGAAG   1150
                     ||||||||||||.|||||||||||||||||||||||||||||.|||||||
BSU27840___sa   1101 GCCAATGACGAACCAGCCTTCTGTAAACCAAATGTTTGGCCGTCCGGAAG   1150

BSNT_04044___   1151 AAGAAAATGAGTGA   1164
                     ||||||||||||||
BSU27840___sa   1151 AAGAAAATGAGTGA   1164


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