Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04041 and BSU27830

See Amino acid alignment / Visit BSNT_04041 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence dna-align/BSNT_04041.1.22522.seq
#    -bsequence dna-align/BSU27830___coxA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04041-BSU27830___coxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04041-BSU27830___coxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04041
# 2: BSU27830___coxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity:     592/597 (99.2%)
# Similarity:   592/597 (99.2%)
# Gaps:           0/597 ( 0.0%)
# Score: 2940.0
# 
#
#=======================================

BSNT_04041         1 TTGGGTAAAAAAATGACGATCGCTAGCCTGATTCTAATGACAGCCGGCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co      1 TTGGGTAAAAAAATGACGATCGCTAGCCTGATTCTAATGACAGCCGGCTT     50

BSNT_04041        51 AACAGCTTGCGGAGCAAACGATAATGCTATGAATGATACGCGCAATAACG    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU27830___co     51 AACAGCATGCGGAGCAAACGATAATGCTATGAATGATACGCGCAATAACG    100

BSNT_04041       101 ACAATACCCGTCCAATCGGATATTATTCAAATGAAAATGACGCCGATAGA    150
                     .|||||||||||||||||||||||||.|||||||||||||||||||||||
BSU27830___co    101 GCAATACCCGTCCAATCGGATATTATACAAATGAAAATGACGCCGATAGA    150

BSNT_04041       151 CAGGGAGACGGAATCGACCACGATGGTCCTGTTTCTGAATTAATGGAGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    151 CAGGGAGACGGAATCGACCACGATGGTCCTGTTTCTGAATTAATGGAGGA    200

BSNT_04041       201 TCAGAACGACGGTAACCGAAACACCACGAATGTAAATAACCGTGACCGTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    201 TCAGAACGACGGTAACCGAAACACCACGAATGTAAATAACCGTGACCGTG    250

BSNT_04041       251 TTACTGCTGACGATCGTGTTCCTTTGGCAACTGACGGAACATATAACAAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    251 TTACTGCTGACGATCGTGTTCCTTTGGCAACTGACGGAACATATAACAAC    300

BSNT_04041       301 ACGAATAACCGAAACATGAATCGGAATGCAGCGAACAACGGGTATGACAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    301 ACGAATAACCGAAACATGAATCGGAATGCAGCGAACAACGGGTATGACAA    350

BSNT_04041       351 CCAAGAAAACAGAAGACTGGCTGCAAAAATTGCCAACCGTGTGAAACAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    351 CCAAGAAAACAGAAGACTGGCTGCAAAAATTGCCAACCGTGTGAAACAAG    400

BSNT_04041       401 TGAAAAACGTCAATGACACACAAGTTATGGTATCGGATGACCGAGTAGTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    401 TGAAAAACGTCAATGACACACAAGTTATGGTATCGGATGACCGAGTAGTT    450

BSNT_04041       451 ATCGCAGTCAAAAGCCACAGAGAGTTCACAAAGTCTGACAGAGATAATGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    451 ATCGCAGTCAAAAGCCACAGAGAGTTCACAAAGTCTGACAGAGATAATGT    500

BSNT_04041       501 CGTAAAAGCAGCGCGCAACTATGCAAATGGCCGTGACGTCCAGGTATCAA    550
                     .|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU27830___co    501 TGTAAAAGCAGCGCGCAACTATGCAAATGGCCGTGACGTCCAAGTATCAA    550

BSNT_04041       551 CAGATAAAGGGCTGTTCAGAAAACTTCATAAAATGAACAACCGCTAG    597
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU27830___co    551 CAGATAAAGGGCTGTTCAGAAAACTTCATAAAATGAACAACCGCTAG    597


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