Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04029 and BSU27770

See Amino acid alignment / Visit BSNT_04029 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence dna-align/BSNT_04029___yrbE.1.22522.seq
#    -bsequence dna-align/BSU27770___yrbE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04029___yrbE-BSU27770___yrbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04029___yrbE-BSU27770___yrbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04029___yrbE
# 2: BSU27770___yrbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1026
# Identity:    1020/1026 (99.4%)
# Similarity:  1020/1026 (99.4%)
# Gaps:           0/1026 ( 0.0%)
# Score: 5076.0
# 
#
#=======================================

BSNT_04029___      1 ATGACAAAACAGATTGTGACAGGGATTATCGGTGCAGGCCGCATCGGCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr      1 ATGACAAAACAGATTGTGACAGGGATTATCGGTGCAGGCCGCATCGGCAA     50

BSNT_04029___     51 ACTTCATGTTCAAAATATAAGCCGGATTCCTCACATGAAAATAAAAGCAG    100
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU27770___yr     51 ACTTCATGTTCAAAATATAAGCCGGATTCCTCACATGAAAATAAAAGCAA    100

BSNT_04029___    101 TCTCTGACATTCAGGCAAGCCGTATAAAAAGCTGGGCCGACAGTCATCAG    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU27770___yr    101 TCTCTGACATTCAGGCGAGCCGTATAAAAAGCTGGGCCGACAGTCATCAG    150

BSNT_04029___    151 ATTGAATACATAACCTCTGATTATCGTGATTTATTACATGATCCTGATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    151 ATTGAATACATAACCTCTGATTATCGTGATTTATTACATGATCCTGATAT    200

BSNT_04029___    201 TGATGCTATTTTTATTTGCTCTCCTACAGCCGTACATGCACAGATGATCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    201 TGATGCTATTTTTATTTGCTCTCCTACAGCCGTACATGCACAGATGATCA    250

BSNT_04029___    251 AAGAAGCAGCCGAGGCGAAAAAGCATATATTTTGTGAGAAGCCCGTTAGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    251 AAGAAGCAGCCGAGGCGAAAAAGCATATATTTTGTGAGAAGCCCGTTAGT    300

BSNT_04029___    301 TTCTCTCTGGACGAAACGAGTGAAGCGCTTGCGGCTGTCCGGAAACACGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    301 TTCTCTCTGGACGAAACGAGTGAAGCGCTTGCGGCTGTCCGGAAACACGG    350

BSNT_04029___    351 GGTAACACTTCAAGTCGGATTTAACCGCCGCTTTGATCCTCATTTTAAGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    351 GGTAACACTTCAAGTCGGATTTAACCGCCGCTTTGATCCTCATTTTAAGA    400

BSNT_04029___    401 AAATCAAAACGATTGTTGAAAATGGTGAAATCGGTACACCTCATTTATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    401 AAATCAAAACGATTGTTGAAAATGGTGAAATCGGTACACCTCATTTATTA    450

BSNT_04029___    451 AGAATCACTTCCCGGGACCCAGAACCCCCGAATATAGATTATGTCCGTAC    500
                     |.||||||.|||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    451 AAAATCACGTCCCGGGACCCAGAACCCCCGAATATAGATTATGTCCGTAC    500

BSNT_04029___    501 GTCAGGCGGATTGTTTATGGATATGTCGATCCATGATTTTGATATGGCCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    501 GTCAGGCGGATTGTTTATGGATATGTCGATCCATGATTTTGATATGGCCA    550

BSNT_04029___    551 GATATATTATGGGAAGCGAAGTGACGGAAGTGTATGCCAAAGGGGCGGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    551 GATATATTATGGGAAGCGAAGTGACGGAAGTGTATGCCAAAGGGGCGGCT    600

BSNT_04029___    601 TTGGTGAATCCTTCTTTTGCGGAGCTGGGTGATATTGATACAGCTGTTAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    601 TTGGTGAATCCTTCTTTTGCGGAGCTGGGTGATATTGATACAGCTGTTAT    650

BSNT_04029___    651 TACACTGACTTTTGAAAACGGTGCCATGGCTGTGATTGATAACAGCCGCC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    651 TACACTGACTTTTGAAAACGGTGCCATGGCTGTGATTGATAACAGCCGCC    700

BSNT_04029___    701 AAGCTGTGTACGGATATGACCAGCGGGTTGAGGTTTTCGGGACGAAAGGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    701 AAGCTGTGTACGGATATGACCAGCGGGTTGAGGTTTTCGGGACGAAAGGC    750

BSNT_04029___    751 TCTGCAGCGGCTGACAATAGCAGGCCGACAACGGTTGAGGTGTCAACAGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    751 TCTGCAGCGGCTGACAATAGCAGGCCGACAACGGTTGAGGTGTCAACAGC    800

BSNT_04029___    801 TGATTTTGTGATGAAGGATAAACCGCATTTCTTTTTCCTTGAACGCTATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    801 TGATTTTGTGATGAAGGATAAACCGCATTTCTTTTTCCTTGAACGCTATA    850

BSNT_04029___    851 AGGATTCATATGAGGAGGAGATTCTCCGTTTTGCAGAAGCGATCGGCACA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27770___yr    851 AGGATTCATATGAGGAGGAGATTCTCCGTTTTGCAGAAGCGATCGGCACA    900

BSNT_04029___    901 AACCAGGAGACTCCCTGCACCGGCAATGACGGTTTACAGGCCGGAAGGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU27770___yr    901 AACCAGGAGACTCCCTGCACCGGCAATGACGGTTTACAGGCCGGGAGGAT    950

BSNT_04029___    951 CGCCAGAGCAGCACAGCAATCGCTTGCTTTTGGCATGCCTGTCAGCATTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU27770___yr    951 CGCCAGAGCAGCACAGCAATCGCTTGCTTTTGGCATGCCTGTTAGCATTG   1000

BSNT_04029___   1001 AGCACACTGAAAAAATCGCTTTTTAA   1026
                     ||||||||||||||||||||||||||
BSU27770___yr   1001 AGCACACTGAAAAAATCGCTTTTTAA   1026


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