Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04023 and BSU27740

See Amino acid alignment / Visit BSNT_04023 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence dna-align/BSNT_04023___ruvA.1.22522.seq
#    -bsequence dna-align/BSU27740___ruvA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04023___ruvA-BSU27740___ruvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04023___ruvA-BSU27740___ruvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04023___ruvA
# 2: BSU27740___ruvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity:     604/606 (99.7%)
# Similarity:   604/606 (99.7%)
# Gaps:           0/606 ( 0.0%)
# Score: 3012.0
# 
#
#=======================================

BSNT_04023___      1 GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru      1 GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATAT     50

BSNT_04023___     51 TGTCATAGAGAACGGCGGCATCGGCTATCAGATTTTCACGCCGAATCCGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru     51 TGTCATAGAGAACGGCGGCATCGGCTATCAGATTTTCACGCCGAATCCGT    100

BSNT_04023___    101 TTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATC    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU27740___ru    101 TTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATC    150

BSNT_04023___    151 AGAGAGGATGCTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGC    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU27740___ru    151 AGAGAGGATGCTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGC    200

BSNT_04023___    201 GCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCGAAAGGAGCAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    201 GCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCGAAAGGAGCAC    250

BSNT_04023___    251 TTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    251 TTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAA    300

BSNT_04023___    301 AATGAAGATGAAGCTTTTTTGGTCAAGTTTCCTGGAGTAGGAAAGAAAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    301 AATGAAGATGAAGCTTTTTTGGTCAAGTTTCCTGGAGTAGGAAAGAAAAC    350

BSNT_04023___    351 CGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    351 CGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC    400

BSNT_04023___    401 CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    401 CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAA    450

BSNT_04023___    451 ACAGCGGAAACGGCTCTTGAAGAAGCACTTGAAGCCCTCAGGGTTCTCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    451 ACAGCGGAAACGGCTCTTGAAGAAGCACTTGAAGCCCTCAGGGTTCTCGG    500

BSNT_04023___    501 ATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    501 ATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAA    550

BSNT_04023___    551 TTGGGCTGACAACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27740___ru    551 TTGGGCTGACAACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTA    600

BSNT_04023___    601 AAGTAA    606
                     ||||||
BSU27740___ru    601 AAGTAA    606


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