Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04020 and BSU27720

See Amino acid alignment / Visit BSNT_04020 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence dna-align/BSNT_04020___queA.1.22522.seq
#    -bsequence dna-align/BSU27720___queA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04020___queA-BSU27720___queA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04020___queA-BSU27720___queA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04020___queA
# 2: BSU27720___queA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity:    1027/1029 (99.8%)
# Similarity:  1027/1029 (99.8%)
# Gaps:           0/1029 ( 0.0%)
# Score: 5127.0
# 
#
#=======================================

BSNT_04020___      1 ATGAAAGTCGATTTATTTGATTTTGAACTACCAGAACGTTTAATTGCACA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu      1 ATGAAAGTCGATTTATTTGATTTTGAACTACCAGAACGTTTAATTGCACA     50

BSNT_04020___     51 AGTACCGTTGGAGCAGCGTGATGCTTCAAGGCTGATGGTGCTCGATAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu     51 AGTACCGTTGGAGCAGCGTGATGCTTCAAGGCTGATGGTGCTCGATAAAC    100

BSNT_04020___    101 ATACAGGAGAGCTTACTGACAGCTCGTTTAAACACATTATCAGCTTCTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    101 ATACAGGAGAGCTTACTGACAGCTCGTTTAAACACATTATCAGCTTCTTT    150

BSNT_04020___    151 AACGAAGGCGATTGTCTAGTCCTGAACAATACCCGGGTACTGCCTGCGCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    151 AACGAAGGCGATTGTCTAGTCCTGAACAATACCCGGGTACTGCCTGCGCG    200

BSNT_04020___    201 GTTATTCGGCACAAAAGAGGATACCGGCGCGAAAGTGGAACTTCTTTTGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    201 GTTATTCGGCACAAAAGAGGATACCGGCGCGAAAGTGGAACTTCTTTTGT    250

BSNT_04020___    251 TGAAACAGGAAACCGGTGATAAATGGGAAACACTTGCCAAACCGGCGAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    251 TGAAACAGGAAACCGGTGATAAATGGGAAACACTTGCCAAACCGGCGAAA    300

BSNT_04020___    301 CGGGTGAAAAAAGGAACTGTTGTCACATTTGGAGACGGAAGATTGAAGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    301 CGGGTGAAAAAAGGAACTGTTGTCACATTTGGAGACGGAAGATTGAAGGC    350

BSNT_04020___    351 AATCTGCACGGAAGAGCTTGAGCACGGCGGCAGAAAGATGGAATTTCAAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    351 AATCTGCACGGAAGAGCTTGAGCACGGCGGCAGAAAGATGGAATTTCAAT    400

BSNT_04020___    401 ATGACGGTATTTTCTACGAGGTGCTTGAATCCCTTGGAGAGATGCCGCTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    401 ATGACGGTATTTTCTACGAGGTGCTTGAATCCCTTGGAGAGATGCCGCTC    450

BSNT_04020___    451 CCTCCATATATCAAAGAACAGCTTGATGACAAAGAGCGCTACCAGACAGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    451 CCTCCATATATCAAAGAACAGCTTGATGACAAAGAGCGCTACCAGACAGT    500

BSNT_04020___    501 GTATTCAAAAGAAATCGGCTCTGCTGCTGCGCCTACAGCTGGCCTTCACT    550
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27720___qu    501 GTATTCAAAAGAAATTGGCTCTGCTGCTGCGCCTACAGCTGGCCTTCACT    550

BSNT_04020___    551 TCACGGAAGAAATCTTACAGCAGCTGAAAGACAAAGGCGTGCAAATTGAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    551 TCACGGAAGAAATCTTACAGCAGCTGAAAGACAAAGGCGTGCAAATTGAG    600

BSNT_04020___    601 TTCATCACACTGCACGTAGGCCTTGGAACGTTTCGCCCTGTGAGTGCCGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    601 TTCATCACACTGCACGTAGGCCTTGGAACGTTTCGCCCTGTGAGTGCCGA    650

BSNT_04020___    651 TGAAGTGGAAGAGCATAATATGCATGCAGAGTTTTATCAAATGTCAGAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    651 TGAAGTGGAAGAGCATAATATGCATGCAGAGTTTTATCAAATGTCAGAAG    700

BSNT_04020___    701 AAACGGCTGCAGCCTTAAACAAAGTAAGAGAAAATGGCGGTCGGATCATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    701 AAACGGCTGCAGCCTTAAACAAAGTAAGAGAAAATGGCGGTCGGATCATT    750

BSNT_04020___    751 TCTGTCGGCACGACCTCGACACGCACGCTTGAGACGATTGCCGGGGAACA    800
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU27720___qu    751 TCTGTCGGCACGACCTCGACACGCACGCTTGAGACGATTGCCGGAGAACA    800

BSNT_04020___    801 TGACGGGCAATTTAAAGCATCAAGCGGCTGGACATCTATTTTTATTTATC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    801 TGACGGGCAATTTAAAGCATCAAGCGGCTGGACATCTATTTTTATTTATC    850

BSNT_04020___    851 CGGGCTATGAATTTAAAGCCATTGACGGAATGATTACAAACTTCCATTTG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    851 CGGGCTATGAATTTAAAGCCATTGACGGAATGATTACAAACTTCCATTTG    900

BSNT_04020___    901 CCGAAATCGTCATTGATTATGCTGGTCAGCGCGCTTGCTGGAAGAGAAAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    901 CCGAAATCGTCATTGATTATGCTGGTCAGCGCGCTTGCTGGAAGAGAAAA    950

BSNT_04020___    951 CATTCTGCGTGCCTATAACCATGCAGTGGAAGAGGAATACCGTTTCTTCA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27720___qu    951 CATTCTGCGTGCCTATAACCATGCAGTGGAAGAGGAATACCGTTTCTTCA   1000

BSNT_04020___   1001 GCTTCGGAGACGCGATGCTGATTATATAA   1029
                     |||||||||||||||||||||||||||||
BSU27720___qu   1001 GCTTCGGAGACGCGATGCTGATTATATAA   1029


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04020 and BSU27720

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
