Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04009 and BSU27640

See Amino acid alignment / Visit BSNT_04009 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence dna-align/BSNT_04009___yrvC.1.22522.seq
#    -bsequence dna-align/BSU27640___yrvC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04009___yrvC-BSU27640___yrvC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04009___yrvC-BSU27640___yrvC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04009___yrvC
# 2: BSU27640___yrvC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     494/498 (99.2%)
# Similarity:   494/498 (99.2%)
# Gaps:           0/498 ( 0.0%)
# Score: 2454.0
# 
#
#=======================================

BSNT_04009___      1 ATGAGGGTTCGCGAATCAGAGCTGCCGGGCATAGGACAAAAAGTTGAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr      1 ATGAGGGTTCGCGAATCAGAGCTGCCGGGCATAGGACAAAAAGTTGAAAT     50

BSNT_04009___     51 GATTACTAGAAACCGTGATAAAATTTCAATTATCATTCATCATGACGGAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr     51 GATTACTAGAAACCGTGATAAAATTTCAATTATCATTCATCATGACGGAC    100

BSNT_04009___    101 GGAGAGAGCTTTACTATTTTGACGAAAACGACCATGAGGAATGTGTTGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr    101 GGAGAGAGCTTTACTATTTTGACGAAAACGACCATGAGGAATGTGTTGCC    150

BSNT_04009___    151 TCCGTGCAGTTTGATGACGCTGAAGCAAGGCAAATGTCTGCAATTCTTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr    151 TCCGTGCAGTTTGATGACGCTGAAGCAAGGCAAATGTCTGCAATTCTTGG    200

BSNT_04009___    201 CGGAATGGCCTATAAACCGAAAGCGTTAGAACCGGTCGAGTCAGCCCTTG    250
                     |||||||||.||||||||||||||.|||||||.|||||||||||||||||
BSU27640___yr    201 CGGAATGGCATATAAACCGAAAGCATTAGAACAGGTCGAGTCAGCCCTTG    250

BSNT_04009___    251 ATGATTTGATTATAGAGTGGTGTAAAGCAGAGGCGGGAGCGCCTGCCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr    251 ATGATTTGATTATAGAGTGGTGTAAAGCAGAGGCGGGAGCGCCTGCCATT    300

BSNT_04009___    301 CATCAGACGATTGGTGATTTGAATGTGGGTCAGGAATATCATGTAACGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU27640___yr    301 CATCAGACGATTGGTGATTTGAATGTGGGTCAGGAATATCATGTGACGGT    350

BSNT_04009___    351 CATTGCAATTGTTAAAAAGAATCAGGATAAACAACTGAATCCGAGCTCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr    351 CATTGCAATTGTTAAAAAGAATCAGGATAAACAACTGAATCCGAGCTCTG    400

BSNT_04009___    401 AAACAGTCATTGACGAAGGCGATACACTTGTGATTTCCGGTGAGGGAACC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr    401 AAACAGTCATTGACGAAGGCGATACACTTGTGATTTCCGGTGAGGGAACC    450

BSNT_04009___    451 GGACTGAAGAGGCTGATCCGGGAAAAATTAACAGCAAAGGGAGCTTAA    498
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU27640___yr    451 GGACTGAAGAGGCTGATCCGGGAAAAATTAACAGCAAAGGGAGCTTAA    498


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