Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04008 and BSU27630

See Amino acid alignment / Visit BSNT_04008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence dna-align/BSNT_04008___yrvD.1.22522.seq
#    -bsequence dna-align/BSU27630___yrvD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04008___yrvD-BSU27630___yrvD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04008___yrvD-BSU27630___yrvD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04008___yrvD
# 2: BSU27630___yrvD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     323/324 (99.7%)
# Similarity:   323/324 (99.7%)
# Gaps:           0/324 ( 0.0%)
# Score: 1611.0
# 
#
#=======================================

BSNT_04008___      1 ATGAATAAACAATGGACCATTATTTTCGCACTTATTTTCACCTTAATTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27630___yr      1 ATGAATAAACAATGGACCATTATTTTCGCACTTATTTTCACCTTAATTGT     50

BSNT_04008___     51 CGCTATTTTCGCAGTCATTAATGTTCGATCCGTAGAAGTTGATTACCTGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27630___yr     51 CGCTATTTTCGCAGTCATTAATGTTCGATCCGTAGAAGTTGATTACCTGT    100

BSNT_04008___    101 TTGGAAGATCAGAATGGCCGCTCATTCTTGTTATTTTGGGCTCAGTTTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27630___yr    101 TTGGAAGATCAGAATGGCCGCTCATTCTTGTTATTTTGGGCTCAGTTTTA    150

BSNT_04008___    151 ATGGGAGCGCTGATCGTATTTTCTGTCGGCATTTTTCAGGTAATGAAATT    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU27630___yr    151 ATGGGAGCACTGATCGTATTTTCTGTCGGCATTTTTCAGGTAATGAAATT    200

BSNT_04008___    201 GAAGCGGGAAATAAAAACCTTGCGGAAAGAAAATAGAACAGCAATACATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27630___yr    201 GAAGCGGGAAATAAAAACCTTGCGGAAAGAAAATAGAACAGCAATACATA    250

BSNT_04008___    251 AACAAGAGGATACTCATCTTGCTGATCAGACTGACACACAGGATGCATCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27630___yr    251 AACAAGAGGATACTCATCTTGCTGATCAGACTGACACACAGGATGCATCA    300

BSNT_04008___    301 GCCATGATTGAGAAAAAAGACTAG    324
                     ||||||||||||||||||||||||
BSU27630___yr    301 GCCATGATTGAGAAAAAAGACTAG    324


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