Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04002 and BSU27580
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_04002___yrvJ.1.22522.seq
# -bsequence dna-align/BSU27580___yrvJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04002___yrvJ-BSU27580___yrvJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04002___yrvJ-BSU27580___yrvJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04002___yrvJ
# 2: BSU27580___yrvJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1686
# Identity: 1549/1686 (91.9%)
# Similarity: 1549/1686 (91.9%)
# Gaps: 129/1686 ( 7.7%)
# Score: 7713.0
#
#
#=======================================
BSNT_04002___ 1 TTGCACACCTTTTTGATTGTATTTACGCTTAGTATAAACAAATCATTTTA 50
BSU27580___yr 0 -------------------------------------------------- 0
BSNT_04002___ 51 TTTTTATTTAAAAATCAGAAAGGACTTTACGATATTAAACAAGAATGCTT 100
BSU27580___yr 0 -------------------------------------------------- 0
BSNT_04002___ 101 TTTTAATGATCATCAGAAAGGAGGACACAATGAACAAGAAATACTTTGTC 150
|||||||||||||||||||||
BSU27580___yr 1 -----------------------------ATGAACAAGAAATACTTTGTC 21
BSNT_04002___ 151 CTTATTGTATGTATTATTTTCACCGCAGCGCTATTCCCGACCTTTTCATC 200
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU27580___yr 22 CTTATTGTATGTATTATTTTCACCTCAGCGCTATTCCCGACCTTTTCATC 71
BSNT_04002___ 201 CGTTACAGCTGCTCAAGGAGAAGCGGTCATCGCAACAGATGAAACGAACG 250
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU27580___yr 72 CGTTACAGCTGCTCAAGGAGAAGCGGTCATCGCAACAGATGAAATGAACG 121
BSNT_04002___ 251 TCAGAAGCGGCCCTGGGCTTAGCTACGGCATTACAGCGGAAGTAAAAAAG 300
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU27580___yr 122 TCAGAAGCGGCCCAGGGCTTAGCTACGGCATTACAGCGGAAGTAAAAAAG 171
BSNT_04002___ 301 GGAGAACGCTATCCAATTTTAAAGGAAGATGGAGACTGGGTGCAGATACA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 172 GGAGAACGCTATCCAATTTTAAAGGAAGATGGAGACTGGGTGCAGATACA 221
BSNT_04002___ 351 GCTTGGTTCCGGAGAAAAGGGCTGGGTAGTCTCCTGGCTTATTACAAAGG 400
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 222 GCTTGGTTCTGGAGAAAAGGGCTGGGTAGTCTCCTGGCTTATTACAAAGG 271
BSNT_04002___ 401 AAGACCAGGCCAGCACAAGCTCCTCAGGAAGCAGTGACACTGTGACATCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 272 AAGACCAGGCCAGCACAAGCTCCTCAGGAAGCAGTGACACTGTGACATCA 321
BSNT_04002___ 451 ACAGACCCCGATCTGCGGATGAGAAGCGGCCCGGGCACTTCCTACGAAGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 322 ACAGACCCCGATCTGCGGATGAGAAGCGGCCCGGGCACTTCCTACGAAGT 371
BSNT_04002___ 501 CATCGGCAAATTCCCGCAAGGCAGCCAAGCATCTGTCATTGATAAAGATT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 372 CATCGGCAAATTCCCGCAAGGCAGCCAAGCATCTGTCATTGATAAAGATT 421
BSNT_04002___ 551 CGGGCTGGATCAAGATATCCTATCACAGTGCCACCGGGTGGGTATCATCT 600
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27580___yr 422 CGGGCTGGATCAAGATATCCTATCACAGTGCCACCGGATGGGTATCATCT 471
BSNT_04002___ 601 GAATATGTCACATCAGGAGGCAGCAGTTCAGCGTCTGATGAGAGTGACCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 472 GAATATGTCACATCAGGAGGCAGCAGTTCAGCGTCTGATGAGAGTGACCA 521
BSNT_04002___ 651 AACCGAGGATTCCGGTGCGTCAACGACGGGCACAGTCGGTGTTTCTTCGC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 522 AACCGAGGATTCCGGTGCGTCAACGACGGGCACAGTCGGTGTTTCTTCGC 571
BSNT_04002___ 701 TAAATGTAAGAGCCTCCGCCTCACATGACGCGGCAATTATAACAAAACTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 572 TAAATGTAAGAGCCTCCGCCTCACATGACGCGGCAATTATAACAAAACTT 621
BSNT_04002___ 751 GATCGCGGAACGAAACTGACGGTTCTCAACGAGAAAAATGGCTGGGCTCA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 622 GATCGCGGAACGAAACTGACGGTTCTCAACGAGAAAAATGGCTGGGCTCA 671
BSNT_04002___ 801 CATTGAGGTGAACGGGCTAAAAGGCTGGGTTGCAAGCCATTACCTTTTGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 672 CATTGAGGTGAACGGGCTAAAAGGCTGGGTTGCAAGCCATTACCTTTTGA 721
BSNT_04002___ 851 CTAGTTCTGTTCCAGCTGATGATTCAGCAAATGCCGGCAGTTCATCCTCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 722 CTAGTTCTGTTCCAGCTGATGATTCAGCAAATGCCGGCAGTTCATCCTCC 771
BSNT_04002___ 901 GCTAAAAAAGCCTATATCATGTACGGAGGAACGAATCTAAGAAGTGATGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 772 GCTAAAAAAGCCTATATCATGTACGGAGGAACGAATCTAAGAAGTGATGC 821
BSNT_04002___ 951 GTCAACATCAGCTTCAATCGTTGAGCGTGCTGCCAAAGGAGATTCATACA 1000
|||||||||||||||.|||||||||||.||||||||||||||||||||||
BSU27580___yr 822 GTCAACATCAGCTTCGATCGTTGAGCGCGCTGCCAAAGGAGATTCATACA 871
BSNT_04002___ 1001 CCATTACCGGTTCAAAGGGAAGCTGGTATGAAATAAAGCTTGATAACGGG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 872 CCATTACCGGTTCAAAGGGAAGCTGGTATGAAATAAAGCTTGATAACGGG 921
BSNT_04002___ 1051 CAAACTGCTTATGTAGCCAATTGGGTGGTCCAAACGTCTAAAAGCGCAGA 1100
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 922 CAGACTGCTTATGTAGCCAATTGGGTGGTCCAAACGTCTAAAAGCGCAGA 971
BSNT_04002___ 1101 AGAAGCAGGTGAACCGCCAGTCTCTGATTCCCCGTCTGGAAACGGCTCTC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 972 AGAAGCAGGTGAACCGCCAGTCTCTGATTCCCCGTCTGGAAACGGCTCTC 1021
BSNT_04002___ 1151 TAAACAATAAAACGATTATTGTTGACCCGGGACATGGAGGAAAAGACAGC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1022 TAAACAATAAAACGATTATTGTTGACCCGGGACATGGAGGAAAAGACAGC 1071
BSNT_04002___ 1201 GGAACGATCGGGTATTCGGGGAAATTCGAGAAAAACCTGACGATCAAAAC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1072 GGAACGATCGGGTATTCGGGGAAATTCGAGAAAAACCTGACGATCAAAAC 1121
BSNT_04002___ 1251 GGCAAAACTGCTCGCCAGCAAACTTAGATCGGCTGGAGCGGATGTATATG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1122 GGCAAAACTGCTCGCCAGCAAACTTAGATCGGCTGGAGCGGATGTATATG 1171
BSNT_04002___ 1301 TGACACGCCAGGATGATACCTTTGTCAGCCTGCAGTCACGGGTCTCTACC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1172 TGACACGCCAGGATGATACCTTTGTCAGCCTGCAGTCACGGGTCTCTACC 1221
BSNT_04002___ 1351 TCTCACTACCGTAACGCTGACGCCTTTATCAGCATTCATTATGACAGCTA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1222 TCTCACTACCGTAACGCTGACGCCTTTATCAGCATTCATTATGACAGCTA 1271
BSNT_04002___ 1401 TGCGGATACCTCTACAAGAGGCAGTACAGCATATTACTACAGTCCTGCCA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1272 TGCGGATACCTCTACAAGAGGCAGTACAGCATATTACTACAGTCCTGCCA 1321
BSNT_04002___ 1451 AAGATCAGGAACTCGCATCAGATGTCCACTCAGAAGTGGTGAAGCGTTCT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1322 AAGATCAGGAACTCGCATCAGATGTCCACTCAGAAGTGGTGAAGCGTTCT 1371
BSNT_04002___ 1501 TCCATTCCAGACCGCGGCGTATTATTCGGAGATTATTATGTGCTCCGGGA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1372 TCCATTCCAGACCGCGGCGTATTATTCGGAGATTATTATGTGCTCCGGGA 1421
BSNT_04002___ 1551 AAACAGACAGCCCGCTATGCTGTACGAGCTGGGATATGTAAGCCATCCGC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1422 AAACAGACAGCCCGCTATGCTGTACGAGCTGGGATATGTAAGCCATCCGC 1471
BSNT_04002___ 1601 AGGAAGAAGCCATTGTACATAGCAATTCATACCAAGAAAAAGTAACAGAT 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27580___yr 1472 AGGAAGAAGCCATTGTACATAGCAATTCATACCAAGAAAAAGTAACAGAT 1521
BSNT_04002___ 1651 GGGATCGAAAGCGGATTAGAGAAATACTTCCAATAA 1686
||||||||||||||||||||||||||||||||||||
BSU27580___yr 1522 GGGATCGAAAGCGGATTAGAGAAATACTTCCAATAA 1557
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