Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03997 and BSU27540

See Amino acid alignment / Visit BSNT_03997 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_03997___yrvM.1.22522.seq
#    -bsequence dna-align/BSU27540___yrvM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03997___yrvM-BSU27540___yrvM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03997___yrvM-BSU27540___yrvM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03997___yrvM
# 2: BSU27540___yrvM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     750/765 (98.0%)
# Similarity:   750/765 (98.0%)
# Gaps:           0/765 ( 0.0%)
# Score: 3690.0
# 
#
#=======================================

BSNT_03997___      1 TTGTTACACCAGTTTTCACGCAATGAATTAGCTATCGGAAAAGAAGGCCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27540___yr      1 TTGTTACACCAGTTTTCACGCAATGAATTAGCTATCGGAAAAGAAGGCCT     50

BSNT_03997___     51 TGAAACGCTGAAAAACAGCACAGTTGCTGTGCTTGGAGTCGGAGGAGTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||.|
BSU27540___yr     51 TGAAACGCTGAAAAACAGCACAGTTGCTGTGCTTGGAGTCGGGGGAGTCG    100

BSNT_03997___    101 GGTCGTTCGCGGCGGAAGCGCTCGCGCGGTCAGGCGTCGGCCGCATTCTG    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU27540___yr    101 GGTCGTTCGCGGCGGAAGCTCTCGCGCGGTCAGGCGTCGGCCGCATTCTG    150

BSNT_03997___    151 CTTGTCGACAAAGATGATGTCGACATTACAAATGTAAACCGTCAGCTTCA    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU27540___yr    151 CTTGTCGACAAAGATGATGTCGACATTACAAATGTAAATCGTCAGCTTCA    200

BSNT_03997___    201 CGCGCTGCTTTCAACTGTCGGACAGCCGAAAGTTGATTTAATGAAGGCGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27540___yr    201 CGCGCTGCTTTCAACTGTCGGACAGCCGAAAGTTGATTTAATGAAGGCGC    250

BSNT_03997___    251 GGATCGCAGACATTAACCCGGAGTGTGAAGTAATCTCGTTAAAAATGTTC    300
                     |||||||||||||||||||||||||||||||.|||.||||||||||||||
BSU27540___yr    251 GGATCGCAGACATTAACCCGGAGTGTGAAGTGATCGCGTTAAAAATGTTC    300

BSNT_03997___    301 TATACGGAGGAAACGTATGAGCAGTTTTTTGACTATGATCTTGACTATGT    350
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27540___yr    301 TATACGGAGGAAACGTATGAGCAGTTTTTTGACTATGGTCTTGACTATGT    350

BSNT_03997___    351 CATTGATGCGTCAGACACCATTTGTTATAAAATTCATTTAATGAAAGAAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27540___yr    351 CATTGATGCGTCAGACACCATTTGTTATAAAATTCATTTAATGAAAGAAT    400

BSNT_03997___    401 GTCTAAAACGGGATATTCCGCTCATCTCCAGCATGGGTGCTGCAAATAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27540___yr    401 GTCTAAAACGGGATATTCCGCTCATCTCCAGCATGGGTGCTGCAAATAAA    450

BSNT_03997___    451 ACGGATCCGACACGCTTCCAAATCGCTGATATCTCAAAAACGCACACTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27540___yr    451 ACGGATCCGACACGCTTCCAAATCGCTGATATCTCAAAAACGCACACTGA    500

BSNT_03997___    501 TCCAATTGCGAAGGTCGTCCGTACGAAATTACGCAAAGAGGGGATCAAAA    550
                     ||||||||||||||||||.|||||||||||||||||.|||||.|||||||
BSU27540___yr    501 TCCAATTGCGAAGGTCGTTCGTACGAAATTACGCAAGGAGGGTATCAAAA    550

BSNT_03997___    551 AAGGCGTCCAAGTGATTTTCTCTGATGAAAGCCCGATTGTCATTCGGGAA    600
                     |||||||.||||||||||||||||||||||||||||||||.|||||||||
BSU27540___yr    551 AAGGCGTTCAAGTGATTTTCTCTGATGAAAGCCCGATTGTTATTCGGGAA    600

BSNT_03997___    601 GATGTCAGAAAAGAAGTGGGAAATGACGAAGCGAAAATCCGTAAAGCAAA    650
                     ||||||||||||||||||||.|||||||||||||||||.|||||||||||
BSU27540___yr    601 GATGTCAGAAAAGAAGTGGGGAATGACGAAGCGAAAATACGTAAAGCAAA    650

BSNT_03997___    651 AATGCCGCCTTCCTCTAATGCTTTTGTGCCGTCAGTTGCAGGTTTGATTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27540___yr    651 AATGCCGCCTTCCTCTAATGCTTTTGTGCCGTCAGTTGCAGGTTTGATTA    700

BSNT_03997___    701 TGGGCGGACATGTTGTCATGGATCTTTTGAAAGACATAGAAATCAAACGT    750
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27540___yr    701 TGGGCGGACATGTTGTCATGGATCTTTTGAAAGACATTGAAATCAAACGT    750

BSNT_03997___    751 GTGAAGGATAAATAA    765
                     |||||||||||||||
BSU27540___yr    751 GTGAAGGATAAATAA    765


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