Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03992 and BSU27500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence dna-align/BSNT_03992___trmU.1.22522.seq
# -bsequence dna-align/BSU27500___trmU.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03992___trmU-BSU27500___trmU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03992___trmU-BSU27500___trmU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03992___trmU
# 2: BSU27500___trmU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity: 1110/1116 (99.5%)
# Similarity: 1110/1116 (99.5%)
# Gaps: 0/1116 ( 0.0%)
# Score: 5526.0
#
#
#=======================================
BSNT_03992___ 1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTCGTCGGCATGTCCGGCGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTCGTCGGCATGTCCGGCGG 50
BSNT_03992___ 51 AGTAGACTCATCTGTGGCGGCCCTGCTGTTAAAAGAACAGGGCTATGATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 51 AGTAGACTCATCTGTGGCGGCCCTGCTGTTAAAAGAACAGGGCTATGATG 100
BSNT_03992___ 101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT 150
BSNT_03992___ 151 TGCACGGCGACAGAGGATTATGAAGATGTGATCCGCGTCTGCAACCAAAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 151 TGCACGGCGACAGAGGATTATGAAGATGTGATCCGCGTCTGCAACCAAAT 200
BSNT_03992___ 201 CGGAATTCCGTATTATGCCGTAAACTTTGAAAAGCAATATTATGAGAAGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 201 CGGAATTCCGTATTATGCCGTAAACTTTGAAAAGCAATATTATGAGAAGG 250
BSNT_03992___ 251 TATTTCAATACTTCCTTGATGAATATAAAGCAGGCAGAACACCAAACCCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 251 TATTTCAATACTTCCTTGATGAATATAAAGCAGGCAGAACACCAAACCCG 300
BSNT_03992___ 301 GATGTATTGTGCAACAAAGAAATTAAATTCAAGGCCTTTTTGGAGCATGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 301 GATGTATTGTGCAACAAAGAAATTAAATTCAAGGCCTTTTTGGAGCATGC 350
BSNT_03992___ 351 ATTGTCACTTGGCGCCGACTATTTAGCGACTGGCCACTATGCAAGAGTAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 351 ATTGTCACTTGGCGCCGACTATTTAGCGACTGGCCACTATGCAAGAGTAG 400
BSNT_03992___ 401 ACAGAAGCGGCGAAAAAGTCAGAATGCTGCGCGGCATTGATGAAAACAAG 450
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU27500___tr 401 ACAGAAGCGGCGGAAAAGTCAGAATGCTGCGCGGCATTGATGAAAACAAG 450
BSNT_03992___ 451 GATCAAACGTACTTCTTGAATCAGCTGACAGAAGATACGCTGAGCAAAGT 500
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27500___tr 451 GATCAAACGTACTTCCTGAATCAGCTGACAGAAGATACGCTGAGCAAAGT 500
BSNT_03992___ 501 CATGTTCCCGATCGGCGAACTTCAAAAAAGCCGTGTGCGTGAAATCGCCA 550
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU27500___tr 501 CATGTTCCCGATCGGCGAACTTCAAAAAAGCCGTGTGCGTGAAATTGCCA 550
BSNT_03992___ 551 AAGAAGCAGAACTTGCAACGGCGACGAAAAAAGACAGTACAGGCATCTGC 600
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU27500___tr 551 AAGAAGCAGAACTTGCAACAGCGACGAAAAAAGACAGTACAGGCATCTGC 600
BSNT_03992___ 601 TTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTCCCTGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 601 TTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTCCCTGC 650
BSNT_03992___ 651 ACAGCCGGGCGATATGATGACGATGGACGGCGAAGTAAAAGGCCGCCACG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 651 ACAGCCGGGCGATATGATGACGATGGACGGCGAAGTAAAAGGCCGCCACG 700
BSNT_03992___ 701 ACGGGTTGATGTACTATACGATCGGACAGCGTCACGGCCTTGGCATCGGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 701 ACGGGTTGATGTACTATACGATCGGACAGCGTCACGGCCTTGGCATCGGC 750
BSNT_03992___ 751 GGAAGCGGCGAGCCGTGGTTTGCGGTAGGGAAAGATCTTGAAAAGAACAT 800
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27500___tr 751 GGAAGCGGCGAGCCGTGGTTTGCGGTAGGCAAAGATCTTGAAAAGAACAT 800
BSNT_03992___ 801 CCTCTACGTAGATCAAGGGTTCCATAACCCTCTTTTATATTCCGACAAAA 850
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27500___tr 801 CCTCTACGTAGATCAAGGGTTCCATAACCCGCTTTTATATTCCGACAAAA 850
BSNT_03992___ 851 TCACAGCAACAAATATCAGCTGGGTACGTTCGGATATCATGAAGGGCGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 851 TCACAGCAACAAATATCAGCTGGGTACGTTCGGATATCATGAAGGGCGAA 900
BSNT_03992___ 901 GAGATTTCCTGCACGGCTAAATTCCGTTACCGCCAAGAGGATCATAAAGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 901 GAGATTTCCTGCACGGCTAAATTCCGTTACCGCCAAGAGGATCATAAAGT 950
BSNT_03992___ 951 AACAGTGCGCATGACTGGCGAAGGTGAAGCGGAAGTCATCTTTGATGAAC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 951 AACAGTGCGCATGACTGGCGAAGGTGAAGCGGAAGTCATCTTTGATGAAC 1000
BSNT_03992___ 1001 AAGTCCGCGCTGTAACGCCGGGACAAGCCGTTGTCTTCTATGACGGCGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 1001 AAGTCCGCGCTGTAACGCCGGGACAAGCCGTTGTCTTCTATGACGGCGAA 1050
BSNT_03992___ 1051 GAATGCCTTGGCGGCGGGACAATTGATGATGTGTACAAAGACGGAACAAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr 1051 GAATGCCTTGGCGGCGGGACAATTGATGATGTGTACAAAGACGGAACAAA 1100
BSNT_03992___ 1101 ATTGTGGTACGTATAA 1116
||||||||||||||||
BSU27500___tr 1101 ATTGTGGTACGTATAA 1116
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