Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03991 and BSU27490

See Amino acid alignment / Visit BSNT_03991 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_03991___yrrB.1.22522.seq
#    -bsequence dna-align/BSU27490___yrrB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03991___yrrB-BSU27490___yrrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03991___yrrB-BSU27490___yrrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03991___yrrB
# 2: BSU27490___yrrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 651
# Identity:     614/651 (94.3%)
# Similarity:   614/651 (94.3%)
# Gaps:          30/651 ( 4.6%)
# Score: 3042.0
# 
#
#=======================================

BSNT_03991___      1 GTGGATTATAATCAACTCGGTATAGAGGCGATGCAGGAAGGCGATTACGA     50
                                                   ||||||||||||||||||||
BSU27490___yr      1 ------------------------------ATGCAGGAAGGCGATTACGA     20

BSNT_03991___     51 GAAAGCGGCAGAGGCATTTACAAAAGCGATTGAAGAAAATAAAGAAGACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27490___yr     21 GAAAGCGGCAGAGGCATTTACAAAAGCGATTGAAGAAAATAAAGAAGACG     70

BSNT_03991___    101 CGATTCCGTATATCAATTTTGCCAACCTGCTTTCATCCGTAAACGAGCTG    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27490___yr     71 CGATTCCGTATATCAATTTTGCCAACCTTCTTTCATCCGTAAACGAGCTG    120

BSNT_03991___    151 GAACGTGCGCTTGCGTTTTATGATAAAGCGCTTGAATTAGACAGTAGCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27490___yr    121 GAACGTGCGCTTGCGTTTTATGATAAAGCGCTTGAATTAGACAGTAGCGC    170

BSNT_03991___    201 AGCCACTGCTTATTATGGAGCAGGAAATGTCTATGTTGTAAAAGAAATGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27490___yr    171 AGCCACTGCTTATTATGGAGCAGGAAATGTCTATGTTGTAAAAGAAATGT    220

BSNT_03991___    251 ACAAAGAAGCGAAAGACATGTTTGAAAAAGCGCTTCGTGCGGGGATGGAA    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU27490___yr    221 ACAAAGAAGCGAAAGACATGTTTGAAAAAGCGCTACGTGCGGGGATGGAA    270

BSNT_03991___    301 AACGGCGACCTATTTTACATGCTCGGAACGGTACTTGTCAAGCTCGAACA    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU27490___yr    271 AACGGCGACCTGTTTTACATGCTCGGAACGGTACTTGTCAAGCTCGAACA    320

BSNT_03991___    351 GCCTAAGCTTGCACTGCCATATTTACAAAGAGCGGTCGAACTGAATGAAA    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU27490___yr    321 GCCTAAGCTTGCACTGCCATATTTACAAAGAGCAGTCGAACTGAATGAAA    370

BSNT_03991___    401 ACGATACGGAAGCGCGTTTTCAATTCGGGATGTGCTTAGCCAACGAGGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27490___yr    371 ACGATACGGAAGCGCGTTTTCAATTCGGGATGTGCTTAGCCAACGAGGGC    420

BSNT_03991___    451 ATGCTGGACGAAGCGCTCAGCCAATTCGCAGCTGTGACAGAGCAAGACCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27490___yr    421 ATGCTGGACGAAGCGCTCAGCCAATTCGCAGCTGTGACAGAGCAAGACCC    470

BSNT_03991___    501 GGGGCATGCAGATGCATTTTATAATGCCGGTGTCGCTTATGCTTATAAAG    550
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU27490___yr    471 GGGGCATGCAGATGCATTTTATAATGCCGGTGTCACTTATGCTTATAAAG    520

BSNT_03991___    551 AAAACCGAGAAAAAGCGCTTGAAATGCTGGACAAGGCAATTGATATCCAG    600
                     |||||||||||||||||||.||||||||||||||||||||.|||||||||
BSU27490___yr    521 AAAACCGAGAAAAAGCGCTGGAAATGCTGGACAAGGCAATCGATATCCAG    570

BSNT_03991___    601 CCAGATCATATGCTTGCGCTTCATGCTAAAAAACTGATTGATCCATCATA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27490___yr    571 CCAGATCATATGCTTGCGCTTCATGCTAAAAAACTGATTGATCCATCATA    620

BSNT_03991___    651 A    651
                     |
BSU27490___yr    621 A    621


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