Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03990 and BSU27480
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_03990___yrrC.1.22522.seq
# -bsequence dna-align/BSU27480___yrrC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03990___yrrC-BSU27480___yrrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03990___yrrC-BSU27480___yrrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03990___yrrC
# 2: BSU27480___yrrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2397
# Identity: 2383/2397 (99.4%)
# Similarity: 2383/2397 (99.4%)
# Gaps: 0/2397 ( 0.0%)
# Score: 11859.0
#
#
#=======================================
BSNT_03990___ 1 GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1 GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAA 50
BSNT_03990___ 51 AGGGACAGTCAACACAGTCATCTATCATAATGACACCAATTTATATACGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 51 AGGGACAGTCAACACAGTCATCTATCATAATGACACCAATTTATATACGG 100
BSNT_03990___ 101 TTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 101 TTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCC 150
BSNT_03990___ 151 GTATCCGTGACGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 151 GTATCCGTGACGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACAC 200
BSNT_03990___ 201 GTTTTACGGAAAGATCGTAACCCATCCAAAGTTCGGGCTCCAATTTCAGG 250
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27480___yr 201 GTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTCCAATTTCAGG 250
BSNT_03990___ 251 CGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 251 CGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAA 300
BSNT_03990___ 301 TATTTATCGAGTGATTTATTCGAGGGGATCGGCAAAAAAACAGCTGAAGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 301 TATTTATCGAGTGATTTATTCGAGGGGATCGGCAAAAAAACAGCTGAAGA 350
BSNT_03990___ 351 AATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGATG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 351 AATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGATG 400
BSNT_03990___ 401 CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCCGACACG 450
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU27480___yr 401 CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCAGACACG 450
BSNT_03990___ 451 CTGGCTGGCGCATTGCAGCGGCATCAGGGACTGGAGCAAATCATGATTTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 451 CTGGCTGGCGCATTGCAGCGGCATCAGGGACTGGAGCAAATCATGATTTC 500
BSNT_03990___ 501 CTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 501 CTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAG 550
BSNT_03990___ 551 CCTATGAATCCGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 551 CCTATGAATCCGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTT 600
BSNT_03990___ 601 GTGAAGGATGTAGAAGGCATCGGGTTTGGGAAAGCGGATGAGCTGGGCAG 650
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27480___yr 601 GTGAAGGATGTAGAAGGCATCGGGTTTGGAAAAGCGGATGAGCTGGGCAG 650
BSNT_03990___ 651 CAGAATGGGTCTTTCGGGTAACCATCCTGAGCGGGTAAAAGCTGCTATTT 700
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU27480___yr 651 CAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTT 700
BSNT_03990___ 701 TGTACACGCTTGAAACGACTTGTCTGTCAGAGGGGCACACGTACATAGAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 701 TGTACACGCTTGAAACGACTTGTCTGTCAGAGGGGCACACGTACATAGAA 750
BSNT_03990___ 751 ACGGAACAGCTGATCATCGACACTCAATCACTGTTAAACCAGTCAGCAAG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 751 ACGGAACAGCTGATCATCGACACTCAATCACTGTTAAACCAGTCAGCAAG 800
BSNT_03990___ 801 GGAAGGGCAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCC 850
|||||||||||||||.|||||||||||||||||||||||.||||||||||
BSU27480___yr 801 GGAAGGGCAGCGCATTACAGAAATGGATGCCGCTAACGCAATTATTGCCC 850
BSNT_03990___ 851 TTGGAGAAAATAAAGACATTGTCATAGAAGATGGCCGCTGTTATTTTCCT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 851 TTGGAGAAAATAAAGACATTGTCATAGAAGATGGCCGCTGTTATTTTCCT 900
BSNT_03990___ 901 TCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 901 TCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGC 950
BSNT_03990___ 951 TAGCCAAACCGAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 951 TAGCCAAACCGAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCG 1000
BSNT_03990___ 1001 CGTTGGGAGAACTGGAAGAACGGATGAATGTTCAGTATGCCCCCAGCCAG 1050
||||||||||||||||||||||||||.|.|||||||||||||||||||||
BSU27480___yr 1001 CGTTGGGAGAACTGGAAGAACGGATGGACGTTCAGTATGCCCCCAGCCAG 1050
BSNT_03990___ 1051 AAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1051 AAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGG 1100
BSNT_03990___ 1101 CGGCCCGGGAACAGGAAAAACGACGGTAATCAGAGGGATTGTCGAGCTCT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1101 CGGCCCGGGAACAGGAAAAACGACGGTAATCAGAGGGATTGTCGAGCTCT 1150
BSNT_03990___ 1151 ACGGAGAGCTTCACGGTGTGTCACTAGATCCGTCAGCTTATAAAAAGGAT 1200
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27480___yr 1151 ACGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT 1200
BSNT_03990___ 1201 GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1201 GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACG 1250
BSNT_03990___ 1251 GATGAGTGAATCAACGGGACTCCCTGCAGTCACGATACACAGGCTGCTTG 1300
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27480___yr 1251 GATGAGTGAATCAACGGGACTCCCTGCAGTTACGATACACAGGCTGCTTG 1300
BSNT_03990___ 1301 GCTGGAACGGTGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAA 1350
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1301 GCTGGAACGGCGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAA 1350
BSNT_03990___ 1351 GGGAAGCTGTTAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1351 GGGAAGCTGTTAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGC 1400
BSNT_03990___ 1401 GAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATCATCATTGTCG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1401 GAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATCATCATTGTCG 1450
BSNT_03990___ 1451 GAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGAC 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1451 GAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGAC 1500
BSNT_03990___ 1501 TTGCTGGCATCCCAGGTGATTCCGACTGTGAGACTGACAGACATCTATCG 1550
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1501 CTGCTGGCATCCCAGGTGATTCCGACTGTGAGACTGACAGACATCTATCG 1550
BSNT_03990___ 1551 CCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG 1600
||||||.||.||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1551 CCAGGCAGAAGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG 1600
BSNT_03990___ 1601 GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATT 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1601 GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATT 1650
BSNT_03990___ 1651 CGCTGCGGCGGGTCGCAAATCAAAGAAGTAGTTGAGAAGGTTGTCGCCAA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1651 CGCTGCGGCGGGTCGCAAATCAAAGAAGTAGTTGAGAAGGTTGTCGCCAA 1700
BSNT_03990___ 1701 TGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1701 TGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGA 1750
BSNT_03990___ 1751 TGTACAGAGGAAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGAC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1751 TGTACAGAGGAAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGAC 1800
BSNT_03990___ 1801 ATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGTTCGGGGATGT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1801 ATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGTTCGGGGATGT 1850
BSNT_03990___ 1851 TGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAA 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1851 TGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAA 1900
BSNT_03990___ 1901 ACAATGTGTTCAACGGAGATATTGGCGAAATCACGTCGATATTTTATGCA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1901 ACAATGTGTTCAACGGAGATATTGGCGAAATCACGTCGATATTTTATGCA 1950
BSNT_03990___ 1951 AAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 1951 AAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA 2000
BSNT_03990___ 2001 TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATT 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2001 TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATT 2050
BSNT_03990___ 2051 GCTGTTCTATTCATAAATCGCAGGGAAGTGAATTTCCGATTGTGGTTTTG 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2051 GCTGTTCTATTCATAAATCGCAGGGAAGTGAATTTCCGATTGTGGTTTTG 2100
BSNT_03990___ 2101 CCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATAC 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2101 CCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATAC 2150
BSNT_03990___ 2151 CGCGATTACAAGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGG 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2151 CGCGATTACAAGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGG 2200
BSNT_03990___ 2201 CGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAGACAGACCTCC 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2201 CGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAGACAGACCTCC 2250
BSNT_03990___ 2251 TTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGA 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2251 TTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGA 2300
BSNT_03990___ 2301 AGCTTTGCAAAAAGAGCTCCCGTTCAGCGTACACGACGCCAACATTGGCA 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2301 AGCTTTGCAAAAAGAGCTCCCGTTCAGCGTACACGACGCCAACATTGGCA 2350
BSNT_03990___ 2351 TGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA 2397
|||||||||||||||||||||||||||||||||||||||||||||||
BSU27480___yr 2351 TGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA 2397
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