Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03983 and BSU27440

See Amino acid alignment / Visit BSNT_03983 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_03983___glnH.1.22522.seq
#    -bsequence dna-align/BSU27440___glnH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03983___glnH-BSU27440___glnH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03983___glnH-BSU27440___glnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03983___glnH
# 2: BSU27440___glnH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     814/822 (99.0%)
# Similarity:   814/822 (99.0%)
# Gaps:           0/822 ( 0.0%)
# Score: 4038.0
# 
#
#=======================================

BSNT_03983___      1 ATGAAAAAGATTTTTTCTTTAGCATTGATTTCTTTATTCGCTGTCATCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl      1 ATGAAAAAGATTTTTTCTTTAGCATTGATTTCTTTATTCGCTGTCATCTT     50

BSNT_03983___     51 GCTTGCCGCTTGCAGCAGCAAGGGATCAAACGGAGAAGCCTCAAAGGAGA    100
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU27440___gl     51 GCTTGCCGCTTGCGGCAGCAAGGGATCAAACGGAGAAGCCTCAAAGGAGA    100

BSNT_03983___    101 GCAAAAAAGATACGCTAGCCGCCATTAAAGACAATGACAAAATTGTCTTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    101 GCAAAAAAGATACGCTAGCCGCCATTAAAGACAATGACAAAATTGTCTTC    150

BSNT_03983___    151 GGCGTAAAAACGGACACTCGACTGTTCGGTCTTAAAAATCCAAGCTCAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    151 GGCGTAAAAACGGACACTCGACTGTTCGGTCTTAAAAATCCAAGCTCAGG    200

BSNT_03983___    201 TGAGATTGAGGGTTTTGATATTGATATTGCCAAACAAATCGCTAAAGACA    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27440___gl    201 TGAGATTGAGGGTTTTGATATTGATATTGCTAAACAAATCGCTAAAGACA    250

BSNT_03983___    251 TTTTAGTTGATGAGAAAAAAGCTGAATTTAAAGAGGTCACCTCAAAAACA    300
                     ||||||.||||||||||||||||.||||||||||||||||||||||||||
BSU27440___gl    251 TTTTAGGTGATGAGAAAAAAGCTCAATTTAAAGAGGTCACCTCAAAAACA    300

BSNT_03983___    301 AGGATTCCTATGCTGCAAAACGGGGATATCGACGCCATTGTCGCCACAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    301 AGGATTCCTATGCTGCAAAACGGGGATATCGACGCCATTGTCGCCACAAT    350

BSNT_03983___    351 GACGATCACTGATGAACGAAAAAAGGAAGTTGACTTTTCTGATGTCTATT    400
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU27440___gl    351 GACGATCACTGAAGAACGAAAAAAGGAAGTTGACTTTTCTGATGTCTATT    400

BSNT_03983___    401 TCGAGGCCGGGCAATCGCTTCTCGTGAAAAAAGGCAGCAAAATCAAGAGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    401 TCGAGGCCGGGCAATCGCTTCTCGTGAAAAAAGGCAGCAAAATCAAGAGT    450

BSNT_03983___    451 GTCGAGGATCTTGACAAAGGCTCAAAAGTTCTTGCAGTAAAAGGCTCCAC    500
                     ||||||.||||||.||||||||||||||||||||||||||||||||||||
BSU27440___gl    451 GTCGAGAATCTTGGCAAAGGCTCAAAAGTTCTTGCAGTAAAAGGCTCCAC    500

BSNT_03983___    501 CTCCTCTCAAAACATTCGTGAAAAGGCGCCTGAAGCATCTGTTTTAGAAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    501 CTCCTCTCAAAACATTCGTGAAAAGGCGCCTGAAGCATCTGTTTTAGAAT    550

BSNT_03983___    551 TTGAAAACTACGCAGAAGCCTTTACAGCCCTTAAATCGGGGCAAGGCGAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    551 TTGAAAACTACGCAGAAGCCTTTACAGCCCTTAAATCGGGGCAAGGCGAT    600

BSNT_03983___    601 GCCCTCACCACAGATAATGCGATTTTATATGGAATGGCTGATGAAAATAA    650
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU27440___gl    601 GCCCTCACCACAGATAATGCAATTTTATATGGAATGGCTGATGAAAATAA    650

BSNT_03983___    651 AAATTATCAATTAACAGGAAAGCCTTTTACAGATGAGCCTTACGGGATCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    651 AAATTATCAATTAACAGGAAAGCCTTTTACAGATGAGCCTTACGGGATCG    700

BSNT_03983___    701 CCGTGAAAAAAGGGCAATCTGCTCTCGCGAAAGAAATCAACGCTTCACTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    701 CCGTGAAAAAAGGGCAATCTGCTCTCGCGAAAGAAATCAACGCTTCACTT    750

BSNT_03983___    751 AAAAAGATGAAGTCGGATGGCAGATACGATGAAATTTATAAAAAATGGAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27440___gl    751 AAAAAGATGAAGTCGGATGGCAGATACGATGAAATTTATAAAAAATGGAT    800

BSNT_03983___    801 CAAAGAAGACCCAGCTGAATAA    822
                     ||||||||||||||||||||||
BSU27440___gl    801 CAAAGAAGACCCAGCTGAATAA    822


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