Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03979 and BSU27420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_03979.1.22522.seq
# -bsequence dna-align/BSU27420___yrrI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03979-BSU27420___yrrI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03979-BSU27420___yrrI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03979
# 2: BSU27420___yrrI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1062
# Identity: 834/1062 (78.5%)
# Similarity: 834/1062 (78.5%)
# Gaps: 222/1062 (20.9%)
# Score: 4146.0
#
#
#=======================================
BSNT_03979 0 -------------------------------------------------- 0
BSU27420___yr 1 ATGCTCCAAAAACCGGTGCAGCTTTTGTTGTGGGTGGCTATTTGTTTGCT 50
BSNT_03979 0 -------------------------------------------------- 0
BSU27420___yr 51 GGTTCTGTTAACAGTCTATGTCTTTTTTATGCTTGATATGTTATGGTCAC 100
BSNT_03979 0 -------------------------------------------------- 0
BSU27420___yr 101 CCTTTTGGCTCGTCATAAAAACGATCTTTATTCCCTTGATCATTTCTATT 150
BSNT_03979 0 -------------------------------------------------- 0
BSU27420___yr 151 TTTATATCTTATTTATTGCTTCCGGTCACAGAATGGCTGCATGGCAAAGG 200
BSNT_03979 1 ----------------------TTGGTCATTTATGTTCTTTTTTTTGGCG 28
||||||||||||||||||||||||||||
BSU27420___yr 201 ATTGCCTAGGACTTTGAGCATCTTGGTCATTTATGTTCTTTTTTTTGGCG 250
BSNT_03979 29 GGATTGGCTGGGCGTTGTATAAAGGGGTGCCTGTTTTAATCGTGCAGCTG 78
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 251 GGATTGGCTGGGCGTTGTATAAAGGGGTGCCTGTTTTAATCGTGCAGCTG 300
BSNT_03979 79 ACGGATTTGTCAGAAAATATACCCATGTTTGCCGAAACGTATAACGGGCT 128
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 301 ACGGATTTGTCAGAAAATATACCCATGTTTGCCGAAACGTATAACGGGCT 350
BSNT_03979 129 TCTTCTTCATGTGCATAACCATACGGATGACTGGCCTGATGGTATGCATC 178
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 351 TCTTCTTCATGTGCATAACCATACGGATGACTGGCCTGATGGTATGCATC 400
BSNT_03979 179 ACCGTATAGATAAAATGATCCGCCAGACGGAGACGTTTTTTGCGGGAACG 228
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU27420___yr 401 ACCGTATAGATAAAATGATCCGCCAGACGGAGGCGTTTTTTGCGGGAACG 450
BSNT_03979 229 ATCGAGGGTGCGATCAGCGGGATCCGCAATGTGCTTGATTACTTCTTAAT 278
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 451 ATCGAGGGTGCGATCAGCGGGATCCGCAATGTGCTTGATTACTTCTTAAT 500
BSNT_03979 279 TGCTGCAACAATCCCTTTTCTCGTGTTTTATATGGTGAAGGACATTGAAT 328
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU27420___yr 501 TGCTGCAACAATCCCTTTTCTCGTGTTTTATATGGTGAAGGACATTGAGT 550
BSNT_03979 329 TAATGAAAAAGACAGTATGGTACTTGACTCCGAAGTCGTGGAGAAAGCGG 378
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 551 TAATGAAAAAGACAGTATGGTACTTGACTCCGAAGTCGTGGAGAAAGCGG 600
BSNT_03979 379 GGCAGCGCCTTTTTGCGGGATGTGGATGATTCGCTTGGCGATTATATCCG 428
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 601 GGCAGCGCCTTTTTGCGGGATGTGGATGATTCGCTTGGCGATTATATCCG 650
BSNT_03979 429 CGGCCAGCTTTTGGTCTGCTTGATTCTTGGCGTGATTGCAGGCATTTCGT 478
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 651 CGGCCAGCTTTTGGTCTGCTTGATTCTTGGCGTGATTGCAGGCATTTCGT 700
BSNT_03979 479 TCTGGGTATTTGGGCTTCCGTATCCACTGATACTTGGCCTTATCTCTGGA 528
|||||||||||||||||||||||||.|||||||||||||||||||||||.
BSU27420___yr 701 TCTGGGTATTTGGGCTTCCGTATCCGCTGATACTTGGCCTTATCTCTGGG 750
BSNT_03979 529 GTAACGAATGTCATCCCGTATTTTGGCCCTTTCATCGGAGCTGTTCCTGC 578
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 751 GTAACGAATGTCATCCCGTATTTTGGCCCTTTCATCGGAGCTGTTCCTGC 800
BSNT_03979 579 GTTGTTAATTGCGATGACGATCTCAGTGAAGGCGGTTCTTGTTGTGGTGA 628
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27420___yr 801 GTTGTTAATTGCGATGACGATCTCAGTCAAGGCGGTTCTTGTTGTGGTGA 850
BSNT_03979 629 TTACGGTGTTTATTCTGCAGTTTATGGAAGGAAATATCCTCAGTCCGTTC 678
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 851 TTACGGTGTTTATTCTGCAGTTTATGGAAGGAAATATCCTCAGTCCGTTC 900
BSNT_03979 679 ATTGTCGGCAGAAGCCTTAAAATGCATCCGGTCGTTATCATGCTTGCACT 728
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 901 ATTGTCGGCAGAAGCCTTAAAATGCATCCGGTCGTTATCATGCTTGCACT 950
BSNT_03979 729 CCTTGCCGGAGGGGAGCTTGCGGGAATCGTCGGGATGATTCTGGCTGTTC 778
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU27420___yr 951 CCTTGCCGGAGGGGAGCTTGCGGGTATCGTCGGGATGATTCTGGCTGTTC 1000
BSNT_03979 779 CTGCGACGGCTGTTTTAAAAGTAATGATGATCCATTTTTTGCGGATGAGG 828
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27420___yr 1001 CTGCGACGGCTGTTTTAAAAGTAATGATGATCCATTTTTTGCGGATGAGG 1050
BSNT_03979 829 ACGGAGCATTGA 840
||||||||||||
BSU27420___yr 1051 ACGGAGCATTGA 1062
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