Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03977 and BSU27410
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_03977___alaS.1.22522.seq
# -bsequence dna-align/BSU27410___alaS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03977___alaS-BSU27410___alaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03977___alaS-BSU27410___alaS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03977___alaS
# 2: BSU27410___alaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2637
# Identity: 2618/2637 (99.3%)
# Similarity: 2618/2637 (99.3%)
# Gaps: 0/2637 ( 0.0%)
# Score: 13014.0
#
#
#=======================================
BSNT_03977___ 1 ATGAAACACTTAACTTCTGCGGAAGTGCGTCAAATGTTTTTGGATTTCTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1 ATGAAACACTTAACTTCTGCGGAAGTGCGTCAAATGTTTTTGGATTTCTT 50
BSNT_03977___ 51 TAAAGAAAAAGGACATGCGGTAGAGCCAAGCGCGTCATTAGTGCCTCATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 51 TAAAGAAAAAGGACATGCGGTAGAGCCAAGCGCGTCATTAGTGCCTCATG 100
BSNT_03977___ 101 AGGATCCTTCACTGCTTTGGATCAACAGCGGTGTTGCGACGCTGAAAAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 101 AGGATCCTTCACTGCTTTGGATCAACAGCGGTGTTGCGACGCTGAAAAAA 150
BSNT_03977___ 151 TATTTTGACGGCCGTGTCGTGCCGGAAAATCCAAGAATCGTAAACGCTCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 151 TATTTTGACGGCCGTGTCGTGCCGGAAAATCCAAGAATCGTAAACGCTCA 200
BSNT_03977___ 201 AAAAGCGATCAGAACAAACGATATAGAAAATGTAGGTAAAACTGCGCGGC 250
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU27410___al 201 AAAAGCGATCAGAACAAACGATATAGAAAATGTAGGTAAAACTGCGCGCC 250
BSNT_03977___ 251 ATCACACTTTCTTTGAAATGCTCGGAAACTTTTCCATCGGCGATTATTTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 251 ATCACACTTTCTTTGAAATGCTCGGAAACTTTTCCATCGGCGATTATTTC 300
BSNT_03977___ 301 AAAGAAGAAGCCATTACATGGGCTTGGGAGTTTTTAACGAGCGACAAGTG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 301 AAAGAAGAAGCCATTACATGGGCTTGGGAGTTTTTAACGAGCGACAAGTG 350
BSNT_03977___ 351 GATTGGCTTCGACAAAGAGCTTCTCTCTGTTACGGTTCATCCTGAAGATG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 351 GATTGGCTTCGACAAAGAGCTTCTCTCTGTTACGGTTCATCCTGAAGATG 400
BSNT_03977___ 401 AAGAGGCATATGAGTTTTGGGCGAAAAAAATCGGTATTCCTGAAGAAAGA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 401 AAGAGGCATATGAGTTTTGGGCGAAAAAAATCGGTATTCCTGAAGAAAGA 450
BSNT_03977___ 451 ATTATCCGTCTGGAAGGGAACTTCTGGGATATCGGTGAAGGGCCGAGCGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 451 ATTATCCGTCTGGAAGGGAACTTCTGGGATATCGGTGAAGGGCCGAGCGG 500
BSNT_03977___ 501 ACCGAATACGGAAATCTTTTACGACCGCGGTGAAGCATACGGTAATGATC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 501 ACCGAATACGGAAATCTTTTACGACCGCGGTGAAGCATACGGTAATGATC 550
BSNT_03977___ 551 CAGAAGATCCGGAGCTTTACCCAGGCGGAGAAAACGACCGTTACCTGGAA 600
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27410___al 551 CAGAAGATCCGGAGCTTTACCCAGGCGGGGAAAACGACCGTTACCTGGAA 600
BSNT_03977___ 601 GTATGGAACCTTGTGTTCTCAGAGTTCAACCATAACCCTGACGGCACGTA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 601 GTATGGAACCTTGTGTTCTCAGAGTTCAACCATAACCCTGACGGCACGTA 650
BSNT_03977___ 651 CACACCGCTTCCGAAGAAAAACATTGATACAGGCATGGGTCTTGAAAGAA 700
||||||||||||.||||||||.||||||||||||||||||||||||||||
BSU27410___al 651 CACACCGCTTCCAAAGAAAAATATTGATACAGGCATGGGTCTTGAAAGAA 700
BSNT_03977___ 701 TGGTATCTGTCATCCAGAATGTTCCGACAAACTTTGACACCGATTTGTTT 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 701 TGGTGTCTGTCATCCAGAATGTTCCGACAAACTTTGACACCGATTTGTTT 750
BSNT_03977___ 751 GTTCCGATCATTAAAGCAACAGAATCGATTTCTGGTGAAACATATGGCAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 751 GTTCCGATCATTAAAGCAACAGAATCGATTTCTGGTGAAACATATGGCAA 800
BSNT_03977___ 801 AGACAATGTGAAAGACACTGCGTTTAAAGTGATTGCTGACCATATCAGAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 801 AGACAATGTGAAAGACACTGCGTTTAAAGTGATTGCTGACCATATCAGAA 850
BSNT_03977___ 851 CGGTTGCCTTTGCTGTCAGTGACGGTGCGCTGCCGTCAAATGAAGGCCGC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 851 CGGTTGCCTTTGCTGTCAGTGACGGTGCGCTGCCGTCAAATGAAGGCCGC 900
BSNT_03977___ 901 GGCTATGTATTAAGACGCTTATTACGCCGTGCCGTGCGTTATGCCAAAAC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 901 GGCTATGTATTAAGACGCTTATTACGCCGTGCCGTGCGTTATGCCAAAAC 950
BSNT_03977___ 951 GATCAACATCCATCGTCCGTTCATGTTTGATTTAGTGCCGGTTGTCGCAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 951 GATCAACATCCATCGTCCGTTCATGTTTGATTTAGTGCCGGTTGTCGCAG 1000
BSNT_03977___ 1001 AAATCATGGCTGATTTCTATCCTGAAGTGAAAGAGAAAGCGGATTTCATC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1001 AAATCATGGCTGATTTCTATCCTGAAGTGAAAGAGAAAGCGGATTTCATC 1050
BSNT_03977___ 1051 GCAAAAGTCATTAAAACCGAGGAAGAACGCTTCCATGAGACCCTTAATGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1051 GCAAAAGTCATTAAAACCGAGGAAGAACGCTTCCATGAGACCCTTAATGA 1100
BSNT_03977___ 1101 AGGGCTTGCGATCCTGTCAGAAATGATCAAAAAAGAAAAAGACAAGGGCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1101 AGGGCTTGCGATCCTGTCAGAAATGATCAAAAAAGAAAAAGACAAGGGCA 1150
BSNT_03977___ 1151 GCAGCGTTATCTCAGGTGCTGATGTGTTTAAACTGTATGATACGTATGGA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1151 GCAGCGTTATCTCAGGTGCTGATGTGTTTAAACTGTATGATACGTATGGA 1200
BSNT_03977___ 1201 TTCCCGGTTGAATTGACTGAAGAATACGCAGAAGACGAGAACATGACGGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1201 TTCCCGGTTGAATTGACTGAAGAATACGCAGAAGACGAGAACATGACGGT 1250
BSNT_03977___ 1251 TGACCATGAGGGCTTTGAGGAGGAAATGAACCAGCAGCGTGAACGGGCAA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1251 TGACCATGAGGGCTTTGAGGAGGAAATGAACCAGCAGCGTGAACGGGCAA 1300
BSNT_03977___ 1301 GAAACGCCCGCCAGGATGTCGGCAGCATGCAGGTGCAGGGCGGCGCACTG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1301 GAAACGCCCGCCAGGATGTCGGCAGCATGCAGGTGCAGGGCGGCGCACTG 1350
BSNT_03977___ 1351 CGCGACGTGACCGATGAAAGCACATTTGTCGGCTACTCTCAAACCAAAGC 1400
|||||||||||.|.||||||||||||||||||||||||||||||||||||
BSU27410___al 1351 CGCGACGTGACAGTTGAAAGCACATTTGTCGGCTACTCTCAAACCAAAGC 1400
BSNT_03977___ 1401 TGATGCCAATATCATTGTGCTTCTTCAGGACGGCCAATTAATCGAAGAGG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1401 TGATGCCAATATCATTGTGCTTCTTCAGGACGGCCAATTAATCGAAGAGG 1450
BSNT_03977___ 1451 CTTATGAAGGAGAAAGCGTTCAAATCATTCTTGATGAAACACCGTTCTAT 1500
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1451 CTCATGAAGGAGAAAGCGTTCAAATCATTCTTGATGAAACACCGTTCTAT 1500
BSNT_03977___ 1501 GCAGAAAGCGGCGGCCAAATCGGGGATAAAGGCTATCTCCGAAGCGAGCA 1550
|||||||||||||||||||||||.||.|||||||||||||||||||||||
BSU27410___al 1501 GCAGAAAGCGGCGGCCAAATCGGCGACAAAGGCTATCTCCGAAGCGAGCA 1550
BSNT_03977___ 1551 GGCAGTTGTAAGAATTAAAGATGTTCAAAAAGCGCCAAACGGCCAGCATG 1600
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU27410___al 1551 GGCAGTTGTAAGAATTAAAGATGTTCAAAAAGCGCCGAACGGCCAGCATG 1600
BSNT_03977___ 1601 TGCATGAAGGTGTTGTGGAGAGCGGTACTGTTCAAAAAGGCCTGCATGTT 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1601 TGCATGAAGGTGTTGTGGAGAGCGGTACTGTTCAAAAAGGCCTGCATGTT 1650
BSNT_03977___ 1651 ACGGCTGAAGTTGAAGACCATATGAGAAGCGGCGTCATTAAAAACCACAC 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1651 ACGGCTGAAGTTGAAGACCATATGAGAAGCGGCGTCATTAAAAACCACAC 1700
BSNT_03977___ 1701 GGCAACGCATTTATTGCATCAGGCTCTAAAAGACGTTCTTGGAACTCATG 1750
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU27410___al 1701 GGCAACGCATTTATTGCATCAGGCTCTAAAAGATGTTCTTGGAACTCATG 1750
BSNT_03977___ 1751 TCAATCAGGCTGGCTCTCTTGTAACGGAAAACCGTCTTCGTTTTGACTTC 1800
||||||||||.|||||||||||||||||||||||.|||||||||||||||
BSU27410___al 1751 TCAATCAGGCGGGCTCTCTTGTAACGGAAAACCGCCTTCGTTTTGACTTC 1800
BSNT_03977___ 1801 TCGCACTTTGGCCAAGTGACAAAAGAAGAGCTCGAACAAATTGAAAGAAT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1801 TCGCACTTTGGCCAAGTGACAAAAGAAGAGCTCGAACAAATTGAAAGAAT 1850
BSNT_03977___ 1851 CGTAAACGAAAAGATCTGGGCGAGCATTCCGGTCAGCATTGATTTGAAAC 1900
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27410___al 1851 CGTAAACGAAAAGATCTGGGCGAGCATCCCGGTCAGCATTGATTTGAAAC 1900
BSNT_03977___ 1901 CGATCGCTGAAGCAAAAGAAATGGGTGCGATGGCACTGTTCGGCGAAAAA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1901 CGATCGCTGAAGCAAAAGAAATGGGTGCGATGGCACTGTTCGGCGAAAAA 1950
BSNT_03977___ 1951 TATGGCGATATTGTCCGTGTCGTTCAAGTTGGAGATTACAGCTTAGAGCT 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 1951 TATGGCGATATTGTCCGTGTCGTTCAAGTTGGAGATTACAGCTTAGAGCT 2000
BSNT_03977___ 2001 GTGCGGCGGCTGCCATGTCAGAAATACAGCAGAAATCGGCTTGTTTAAAA 2050
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27410___al 2001 GTGCGGCGGCTGCCACGTCAGAAATACAGCAGAAATCGGCTTGTTTAAAA 2050
BSNT_03977___ 2051 TCGTTTCTGAATCCGGAATCGGAGCAGGCACAAGACGGATTGAAGCTGTA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2051 TCGTTTCTGAATCCGGAATCGGAGCAGGCACAAGACGGATTGAAGCTGTA 2100
BSNT_03977___ 2101 ACGGGACAAGGCGCTTACGTCGAAATGAACAGCCAGATTTCTGTATTGAA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2101 ACGGGACAAGGCGCTTACGTCGAAATGAACAGCCAGATTTCTGTATTGAA 2150
BSNT_03977___ 2151 GCAGACCGCTGACGAGCTGAAAACAAATATCAAAGAAGTGCCGAAACGGG 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2151 GCAGACCGCTGACGAGCTGAAAACAAATATCAAAGAAGTGCCGAAACGGG 2200
BSNT_03977___ 2201 TTGCGGCTCTGCAGGCTGAACTGAAGGAAGCACAAAGAGAAAATGAATCT 2250
|.||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27410___al 2201 TCGCGGCTCTGCAGGCTGAACTGAAGGATGCACAAAGAGAAAATGAATCT 2250
BSNT_03977___ 2251 CTTCTTGCAAAACTAGGCAACGTGGAAGCAGGAGCAATCCTGTCGAAAGT 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2251 CTTCTTGCAAAACTAGGCAACGTGGAAGCAGGAGCAATCCTGTCGAAAGT 2300
BSNT_03977___ 2301 AAAAGAAGTTGACGGCGTAAACGTGCTTGCGGCAAAAGTAAATGCAAAAG 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2301 AAAAGAAGTTGACGGCGTAAACGTGCTTGCGGCAAAAGTAAATGCAAAAG 2350
BSNT_03977___ 2351 ACATGAATCATCTCCGCACTATGGTCGATGAACTCAAAGCAAAGCTTGGC 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2351 ACATGAATCATCTCCGCACTATGGTCGATGAACTCAAAGCAAAGCTTGGC 2400
BSNT_03977___ 2401 TCTGCGGTGATCGTGCTTGGTGCGGTACAAAACGATAAAGTTAATATCTC 2450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2401 TCTGCGGTGATCGTGCTTGGTGCGGTACAAAACGATAAAGTTAATATCTC 2450
BSNT_03977___ 2451 TGCCGGAGTCACAAAGGACCTCATTGAGAAAGGCCTTCACGCCGGCAAGC 2500
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU27410___al 2451 TGCCGGAGTCACAAAGGACCTCATTGAGAAAGGACTTCACGCCGGCAAGC 2500
BSNT_03977___ 2501 TGGTTAAACAAGCTGCGGAAGTTTGCGGCGGAGGCGGCGGAGGCCGTCCG 2550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2501 TGGTTAAACAAGCTGCGGAAGTTTGCGGCGGAGGCGGCGGAGGCCGTCCG 2550
BSNT_03977___ 2551 GACATGGCGCAGGCAGGCGGTAAACAGCCGGAAAAATTAGAAGAAGCTTT 2600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al 2551 GACATGGCGCAGGCAGGCGGTAAACAGCCGGAAAAATTAGAAGAAGCTTT 2600
BSNT_03977___ 2601 GGCTTCTGTAGAAGATTGGGTGAAATCCGTTTTATAA 2637
|||||||||||||||||||||||||||||||||||||
BSU27410___al 2601 GGCTTCTGTAGAAGATTGGGTGAAATCCGTTTTATAA 2637
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