Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03971 and BSU27360
See
Amino acid alignment /
Visit
BSNT_03971 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_03971___yrrM.1.22522.seq
# -bsequence dna-align/BSU27360___yrrM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03971___yrrM-BSU27360___yrrM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03971___yrrM-BSU27360___yrrM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03971___yrrM
# 2: BSU27360___yrrM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 648/654 (99.1%)
# Similarity: 648/654 (99.1%)
# Gaps: 0/654 ( 0.0%)
# Score: 3216.0
#
#
#=======================================
BSNT_03971___ 1 GTGACTGACCGGTATGAACAAATAAATGACTATATAGAAGCATTATTAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 1 GTGACTGACCGGTATGAACAAATAAATGACTATATAGAAGCATTATTAAA 50
BSNT_03971___ 51 GCCTCGGCCGGATAACGTGAAGAAGCTTGAAGCATATGCAGAAGAACATC 100
|||||||||||||||||||||||..|||||||||||||||||||||||||
BSU27360___yr 51 GCCTCGGCCGGATAACGTGAAGAGACTTGAAGCATATGCAGAAGAACATC 100
BSNT_03971___ 101 ATGTCCCGATTATGGAAAAAGCGGGCATGGAGGTGCTGCTTCAAATTTTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 101 ATGTCCCGATTATGGAAAAAGCGGGCATGGAGGTGCTGCTTCAAATTTTG 150
BSNT_03971___ 151 TCTGTGAAACAGCCGAAAAAAATACTAGAAATCGGAACGGCCATTGGTTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 151 TCTGTGAAACAGCCGAAAAAAATACTAGAAATCGGAACGGCCATTGGTTA 200
BSNT_03971___ 201 TTCAGCCATTCGGATGGCGCTGGAGCTGCCGTCTGCTGAAATATATACAA 250
||||||||||||.|||||.|||||.|||||||||||||||||||||||||
BSU27360___yr 201 TTCAGCCATTCGAATGGCTCTGGAACTGCCGTCTGCTGAAATATATACAA 250
BSNT_03971___ 251 TTGAACGCAATGAGAAACGGCATGAAGAAGCGGTAAACAATATCAAGGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 251 TTGAACGCAATGAGAAACGGCATGAAGAAGCGGTAAACAATATCAAGGAA 300
BSNT_03971___ 301 TTTCAGCTTGATGACCGGATTCATGTTTTTTACGGAGATGCGCTTGAATT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 301 TTTCAGCTTGATGACCGGATTCATGTTTTTTACGGAGATGCGCTTGAATT 350
BSNT_03971___ 351 AGCCGACGCCGTTCATGTAACCGCGCCTTACGATGTCATTTTTATTGACG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 351 AGCCGACGCCGTTCATGTAACCGCGCCTTACGATGTCATTTTTATTGACG 400
BSNT_03971___ 401 CTGCAAAAGGTCAGTATCAAAACTTTTTTCATTTATATGAACCGATGCTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 401 CTGCAAAAGGTCAGTATCAAAACTTTTTTCATTTATATGAACCGATGCTT 450
BSNT_03971___ 451 TCACCGGACGGGGTGATTATAACAGACAACGTGCTGTTTAAAGGTCTGGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 451 TCACCGGACGGGGTGATTATAACAGACAACGTGCTGTTTAAAGGTCTGGT 500
BSNT_03971___ 501 GGCAGAGGATTACAGCAAAATAGAACCGAAGAGAAGGCGCAGGCTTGTAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 501 GGCAGAGGATTACAGCAAAATAGAACCGAAGAGAAGGCGCAGGCTTGTAG 550
BSNT_03971___ 551 CAAAAATTGATGAATATAATCATTGGCTGATGAATCATCCGGATTATCAA 600
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 551 CCAAAATTGATGAATATAATCATTGGCTGATGAATCATCCGGATTATCAA 600
BSNT_03971___ 601 ACTGCGATTATTCCTGTCGGGGACGGACTTGCGATTAGTAAAAAGAAGAG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27360___yr 601 ACTGCGATTATTCCTGTCGGGGACGGACTTGCGATTAGTAAAAAGAAGAG 650
BSNT_03971___ 651 GTGA 654
||||
BSU27360___yr 651 GTGA 654
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.