Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03964 and BSU27310

See Amino acid alignment / Visit BSNT_03964 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence dna-align/BSNT_03964___yrrR.1.22522.seq
#    -bsequence dna-align/BSU27310___pbpI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03964___yrrR-BSU27310___pbpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03964___yrrR-BSU27310___pbpI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03964___yrrR
# 2: BSU27310___pbpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1755
# Identity:    1734/1755 (98.8%)
# Similarity:  1734/1755 (98.8%)
# Gaps:           0/1755 ( 0.0%)
# Score: 8586.0
# 
#
#=======================================

BSNT_03964___      1 ATGAAGATATCGAAACGAATGAAGCTGGCAGTCATCGCTTTTTTGATTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb      1 ATGAAGATATCGAAACGAATGAAGCTGGCAGTCATCGCTTTTTTGATTGT     50

BSNT_03964___     51 ATTTTTTCTGCTTCTGCTGAGGCTTGCGGAAATCCAGCTGTTTTTCACAG    100
                     |||||||||||||||||||||.|||||.||||||||||||||||||||||
BSU27310___pb     51 ATTTTTTCTGCTTCTGCTGAGACTTGCAGAAATCCAGCTGTTTTTCACAG    100

BSNT_03964___    101 AATCATTTTCTAAAAAGAAAATTAATTTGATTCAAGAAAGTGTGAAACAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    101 AATCATTTTCTAAAAAGAAAATTAATTTGATTCAAGAAAGTGTGAAACAG    150

BSNT_03964___    151 CGGACGGAGGAAGTGCTCATTTCAGATGGAAGAGGCTCTTTTTTAGATCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    151 CGGACGGAGGAAGTGCTCATTTCAGATGGAAGAGGCTCTTTTTTAGATCG    200

BSNT_03964___    201 AAACGGGCGGGCGCTGACAGGACAAAGCGAGCCCGCGGTTGTTTTGTTCC    250
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU27310___pb    201 AAACGGGCGGGCGCTGACAGGACAAAGCGAGCCTGCGGTTGTTTTGTTCC    250

BSNT_03964___    251 CTTTTCTGCTGACGCAGGATTGGCCGATCAAAAAAGTTGCGGACATCCTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    251 CTTTTCTGCTGACGCAGGATTGGCCGATCAAAAAAGTTGCGGACATCCTC    300

BSNT_03964___    301 GGCATGTCTGAAGATAATTTGCGCCAGACACTAGGTCAGGCAAAAAAACC    350
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27310___pb    301 GGCATGTCTGAAGATGATTTGCGCCAGACACTAGGTCAGGCAAAAAAACC    350

BSNT_03964___    351 GGTCATTTTGCAGCAAAAGAAAATCAAAACACTTTCAAAACAATCTATCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    351 GGTCATTTTGCAGCAAAAGAAAATCAAAACACTTTCAAAACAATCTATCA    400

BSNT_03964___    401 CAAAAATCAATTCTTTGAAATATCCCGGCATTTACGGCGTATATATGGAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    401 CAAAAATCAATTCTTTGAAATATCCCGGCATTTACGGCGTATATATGGAG    450

BSNT_03964___    451 AATGAAGACAAGCCCAGCCTTGCTTCACATACGATAGGGAGCACGAACCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    451 AATGAAGACAAGCCCAGCCTTGCTTCACATACGATAGGGAGCACGAACCA    500

BSNT_03964___    501 AGATCCGGCGCTGCTTCGCAAGAAATATCCTGACAAGGGAAGTCTTCCGA    550
                     ||||||||||||||||||||||||||||||||||||||..||.|||||||
BSU27310___pb    501 AGATCCGGCGCTGCTTCGCAAGAAATATCCTGACAAGGAGAGCCTTCCGA    550

BSNT_03964___    551 TTACAACAGAAATCGGAACAACCGGCTTAGAACGGACATTTGACGAGTTT    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU27310___pb    551 TTACAACAGAAATCGGAACAACCGGTTTAGAACGGACATTTGACGAGTTT    600

BSNT_03964___    601 TTGCTTCCGGAACAAGACACAAAGCTTTTATATCATGTGGACGGAAAAGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    601 TTGCTTCCGGAACAAGACACAAAGCTTTTATATCATGTGGACGGAAAAGG    650

BSNT_03964___    651 AAACCCTTTGTTTGGCATGGACGTCAAATATACAGCTGAAGCCAATACAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    651 AAACCCTTTGTTTGGCATGGACGTCAAATATACAGCTGAAGCCAATACAT    700

BSNT_03964___    701 TTTATCCGCTCCAGGTCAAAACAACGATCGATCAAAGCATTCAAAAAGCG    750
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU27310___pb    701 TTTATCCGCTCCAGATCAAAACAACGATCGATCAAAGCATTCAAAAAGCG    750

BSNT_03964___    751 ATGGAGGAGGTATTGGATGAACAGGGGCTGAAAAAGGGAGGAGCTGTGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    751 ATGGAGGAGGTATTGGATGAACAGGGGCTGAAAAAGGGAGGAGCTGTGCT    800

BSNT_03964___    801 GCTGGACATCGAAAATAGCAGTGTTCTGGGAATTGTAAGCAAACCAGATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    801 GCTGGACATCGAAAATAGCAGTGTTCTGGGAATTGTAAGCAAACCAGATG    850

BSNT_03964___    851 CAGACGTGTCCCGGCAAAACACACTTCAAAATTATATGCTGACGCCAATC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    851 CAGACGTGTCCCGGCAAAACACACTTCAAAATTATATGCTGACGCCAATC    900

BSNT_03964___    901 TATCCCGGATCAGTTTTTAAAACAGTCATTGCCGCAGCTGCAATCGAAAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb    901 TATCCCGGATCAGTTTTTAAAACAGTCATTGCCGCAGCTGCAATCGAAAA    950

BSNT_03964___    951 TAATATGGTGAAGCCTAGTCAAACCTTTAATTGCAATTTTAACCTGTACG   1000
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU27310___pb    951 TAATATGGTGAAGCCTAGTCAAACCTTTAATTGCAATTTAAACCTGTACG   1000

BSNT_03964___   1001 GGGAACCGGGGGACGACAAAGGAACCTTGTCTTTTGATGAAAGTTTTGCC   1050
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU27310___pb   1001 GGGAACCGGGGGACGACAAAGGCACCTTGTCTTTTGATGAAAGTTTTGCC   1050

BSNT_03964___   1051 CAAAGCTGTAATTACACATTTACGAGTCTTGCAGAACAATTAATGAAAAA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1051 CAAAGCTGTAATTACACATTTACGAGTCTTGCAGAACAATTAATGAAAAA   1100

BSNT_03964___   1101 AGACAGCTCAGTTATTGAAGATATGTCCGAGAAGCTGGCTCTCACTGATC   1150
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1101 AGACAGCTCGGTTATTGAAGATATGTCCGAGAAGCTGGCTCTCACTGATC   1150

BSNT_03964___   1151 GGGCAGGCTGGGAGGGAAAACTGTACCACGAAACCGATTTCCGCCAGCTG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1151 GGGCAGGCTGGGAGGGAAAACTGTACCACGAAACCGATTTCCGCCAGCTG   1200

BSNT_03964___   1201 TATAACGAAAAAAGCGGCGTGATTTGGGGGGATGAAAAAGACAAATCAGT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1201 TATAACGAAAAAAGCGGCGTGATTTGGGGGGATGAAAAAGACAAATCAGT   1250

BSNT_03964___   1251 CAAAAAAGCCATTGCGCAAACAGCAATCGGGCAGAAAAATGTAAAGGTAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1251 CAAAAAAGCCATTGCGCAAACAGCAATCGGGCAGAAAAATGTAAAGGTAA   1300

BSNT_03964___   1301 CGCCGCTAGAGGTAGCCAATATGATGGCGACAATCGCCCGCGGCGGAGAA   1350
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1301 CGCCGCTGGAGGTAGCCAATATGATGGCGACAATCGCCCGCGGCGGAGAA   1350

BSNT_03964___   1351 AAACGGCAGGTGAAAATTGCCGAACAAATTGAGTATAAGAACGGCACAAC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1351 AAACGGCAGGTGAAAATTGCCGAACAAATTGAGTATAAGAACGGCACAAC   1400

BSNT_03964___   1401 GCTCGTTACATTTAAGGATCAGAAGCTCAAAGGGGAAACGATAGACAAAT   1450
                     |||||||||.|||||.||||||||||||||||||||||||||||||||||
BSU27310___pb   1401 GCTCGTTACGTTTAAAGATCAGAAGCTCAAAGGGGAAACGATAGACAAAT   1450

BSNT_03964___   1451 ATACGTCACAGCAGCTTCAAAAAATACTGCGGCGGGTGGTAGAATCTCCT   1500
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27310___pb   1451 ATACGTCACAGCAGCTTCAAAAAATACTGCGGCGGGTAGTAGAATCTCCT   1500

BSNT_03964___   1501 TCTGGAACGGGCAGAAGGTTTCAAGATCTTCCGTATACTGTAGCAGGGAA   1550
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1501 TCCGGAACGGGCAGAAGGTTTCAAGATCTTCCGTATACTGTAGCAGGGAA   1550

BSNT_03964___   1551 ATCGGGCACAGCCCAAACAGGCAAGCTTTCAAAAGAGAAGGAAACGCTCT   1600
                     .||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27310___pb   1551 GTCGGGCACAGCCCAGACAGGCAAGCTTTCAAAAGAGAAGGAAACGCTCT   1600

BSNT_03964___   1601 ATGAAAAATGGTTTGCCGGATATTTTCCCGCGGATAAGCCGAAATACGCT   1650
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1601 ACGAAAAATGGTTTGCCGGATATTTTCCCGCGGATAAGCCGAAATACGCT   1650

BSNT_03964___   1651 CTGGTTGTTTTACACATGGATACACCGGGAGATAAGGCTCTGACAAATTC   1700
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1651 CTAGTTGTTTTACACATGGATACACCGGGAGATAAGGCTCTGACAAATTC   1700

BSNT_03964___   1701 GGTGTTTTATGATATTGTTAAAAAAGTACACGAAATTGAAATCAATCAGA   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27310___pb   1701 GGTGTTTTATGATATTGTTAAAAAAGTACACGAAATTGAAATCAATCAGA   1750

BSNT_03964___   1751 AATAG   1755
                     |||||
BSU27310___pb   1751 AATAG   1755


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