Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03963 and BSU27300

See Amino acid alignment / Visit BSNT_03963 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence dna-align/BSNT_03963___yrrS.1.22522.seq
#    -bsequence dna-align/BSU27300___yrrS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03963___yrrS-BSU27300___yrrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03963___yrrS-BSU27300___yrrS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03963___yrrS
# 2: BSU27300___yrrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity:     694/702 (98.9%)
# Similarity:   694/702 (98.9%)
# Gaps:           0/702 ( 0.0%)
# Score: 3438.0
# 
#
#=======================================

BSNT_03963___      1 TTGAGCAATAATCAATCTCGTTATGAAAATCGTGATAAACGCAGAAAAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr      1 TTGAGCAATAATCAATCTCGTTATGAAAATCGTGATAAACGCAGAAAAGC     50

BSNT_03963___     51 CAATTTAGTGCTTAACATTTTAATCGCAATCGTATCCATACTAATTGTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr     51 CAATTTAGTGCTTAACATTTTAATCGCAATCGTATCCATACTAATTGTCG    100

BSNT_03963___    101 TAGTAGCAGCGAATCTCTTCATTAACAGTCCTTCTAGCAAAGATGTCAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    101 TAGTAGCAGCGAATCTCTTCATTAACAGTCCTTCTAGCAAAGATGTCAGC    150

BSNT_03963___    151 AAGGATTCTGAAACGGCGCAAAAACAGGAATCTCCGGCTTCAGGAAAGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    151 AAGGATTCTGAAACGGCGCAAAAACAGGAATCTCCGGCTTCAGGAAAGAC    200

BSNT_03963___    201 GGAAAAGAAATCGGATGAGGATATAAAAGACAGCAAGAAAGATACATCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    201 GGAAAAGAAATCGGATGAGGATATAAAAGACAGCAAGAAAGATACATCTG    250

BSNT_03963___    251 ACAGCGAAAAGGATTCTGAGAAGTCTTCTGACTCTGATTCCAAAAAAGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    251 ACAGCGAAAAGGATTCTGAGAAGTCTTCTGACTCTGATTCCAAAAAAGAT    300

BSNT_03963___    301 GATTCTTCTTCTAAAAAGGATGATTCTGATTCAGATTCAAGCTCAGATTC    350
                     |||||||||||||||||.|||||.||||||||||||||||||||||||||
BSU27300___yr    301 GATTCTTCTTCTAAAAAAGATGACTCTGATTCAGATTCAAGCTCAGATTC    350

BSNT_03963___    351 AGCCAGTGATGGGCTTAAAGATGCAAAAGTAACAGAAGGCGGCTCATCGA    400
                     ||||.||||.||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    351 AGCCGGTGACGGGCTTAAAGATGCAAAAGTAACAGAAGGCGGCTCATCGA    400

BSNT_03963___    401 GCGATGTGGAAAAAACGTATGAAAATCCTGACTGGAAAGCAGTCGGAACT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    401 GCGATGTGGAAAAAACGTATGAAAATCCTGACTGGAAAGCAGTCGGAACT    450

BSNT_03963___    451 GAGCAAACAGGCGAGCATGCCGCTACTTATGATTCAAGCTCGCAAGACTG    500
                     |||||.||.||||||||||||||||||||||||||||||||.||||||||
BSU27300___yr    451 GAGCAGACTGGCGAGCATGCCGCTACTTATGATTCAAGCTCACAAGACTG    500

BSNT_03963___    501 GGCTGAGATGCTGAAAGCCATTTCATACGCAACTGGTGTCTCAACAGATA    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU27300___yr    501 GGCTGAGATGCTGAAAGCCATTTCGTACGCAACTGGTGTCTCAACAGATA    550

BSNT_03963___    551 ACATGACGGTGCTCTGGCTTGGAAATAACGGCAGCCCTCAGGATGCCAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    551 ACATGACGGTGCTCTGGCTTGGAAATAACGGCAGCCCTCAGGATGCCAAA    600

BSNT_03963___    601 GGCAAGATTTTGGACAAGGCGACTGGGAATAAATATCAAGTCACGATTAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    601 GGCAAGATTTTGGACAAGGCGACTGGGAATAAATATCAAGTCACGATTAC    650

BSNT_03963___    651 ATGGGTCGATGAAAAAGGCTGGAAGCCGACAAAAGTAGAAAAGCTAAAAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27300___yr    651 ATGGGTCGATGAAAAAGGCTGGAAGCCGACAAAAGTAGAAAAGCTAAAAT    700

BSNT_03963___    701 AA    702
                     ||
BSU27300___yr    701 AA    702


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