Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03957 and BSU27250

See Amino acid alignment / Visit BSNT_03957 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence dna-align/BSNT_03957___yrhB.1.22522.seq
#    -bsequence dna-align/BSU27250___yrhB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03957___yrhB-BSU27250___yrhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03957___yrhB-BSU27250___yrhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03957___yrhB
# 2: BSU27250___yrhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1140
# Identity:    1123/1140 (98.5%)
# Similarity:  1123/1140 (98.5%)
# Gaps:           0/1140 ( 0.0%)
# Score: 5547.0
# 
#
#=======================================

BSNT_03957___      1 ATGAAGAAAAAAACTTTGATGATACATGGCGGAATCACAGGTGATGAGAA     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU27250___yr      1 ATGAAGAAAAAAACATTGATGATACATGGCGGAATCACAGGTGATGAGAA     50

BSNT_03957___     51 AACAGGCGCAGTTTCCGTGCCCATTTATCAAGTAAGCACGTACAAGCAGC    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU27250___yr     51 AACAGGCGCAGTTTCCGTGCCGATTTATCAAGTAAGCACGTACAAGCAGC    100

BSNT_03957___    101 CGAAAGCAGGACAGCATACAGGCTACGAGTATTCAAGAACGGCCAATCCG    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU27250___yr    101 CGAAAGCAGGGCAGCATACAGGCTACGAGTATTCAAGAACGGCCAATCCG    150

BSNT_03957___    151 ACTCGAACCGCTCTCGAAGCACTTGTGACAGAACTGGAAAGCGGGGAAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    151 ACTCGAACCGCTCTCGAAGCACTTGTGACAGAACTGGAAAGCGGGGAAGC    200

BSNT_03957___    201 AGGTTATGCGTTCAGTTCGGGAATGGCTGCCATTACAGCAGTTATGATGC    250
                     |||.|||||||||||.||.||||||||||||||||||||.||||||||||
BSU27250___yr    201 AGGCTATGCGTTCAGCTCAGGAATGGCTGCCATTACAGCGGTTATGATGC    250

BSNT_03957___    251 TGTTTAACAGCGGAGATCATGTCGTGTTGACTGATGATGTGTACGGCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    251 TGTTTAACAGCGGAGATCATGTCGTGTTGACTGATGATGTGTACGGCGGA    300

BSNT_03957___    301 ACATATCGCGTGATGACAAAGGTGCTTAACCGTCTTGGCATTGAATCAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    301 ACATATCGCGTGATGACAAAGGTGCTTAACCGTCTTGGCATTGAATCAAC    350

BSNT_03957___    351 ATTTGTTGATACGAGCAGCAGGGAAGAAGTTGAAAAAGCGATTCGCCCTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    351 ATTTGTTGATACGAGCAGCAGGGAAGAAGTTGAAAAAGCGATTCGCCCTA    400

BSNT_03957___    401 ATACAAAAGCCATTTATATTGAAACACTGACAAATCCGTTGCTCAAAATC    450
                     ||||||||||.||||||||||||||||.||||||.|||||||||||||||
BSU27250___yr    401 ATACAAAAGCAATTTATATTGAAACACCGACAAACCCGTTGCTCAAAATC    450

BSNT_03957___    451 ACCGACTTGACGCTCATGGCTGATATCGCAAAAAAAGCGGGTGTTCTGCT    500
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    451 ACCGACCTGACGCTCATGGCTGATATCGCAAAAAAAGCGGGTGTTCTGCT    500

BSNT_03957___    501 TATCGTAGACAACACCTTTAATACTCCTTATTTTCAGCAACCGCTTACTT    550
                     ||||||||||||.|||||||||||||||||||||||.||.||||||||||
BSU27250___yr    501 TATCGTAGACAATACCTTTAATACTCCTTATTTTCAACAGCCGCTTACTT    550

BSNT_03957___    551 TAGGCGCTGATATCGTACTTCACAGTGCGACAAAATATCTTGGCGGACAC    600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU27250___yr    551 TAGGCGCTGATATCGTACTGCACAGTGCGACAAAATATCTTGGCGGACAC    600

BSNT_03957___    601 AGTGATGTCGTCGGAGGTTTAGTTGTGACAGCTTCGAAAGAGCTTGGAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    601 AGTGATGTCGTCGGAGGTTTAGTTGTGACAGCTTCGAAAGAGCTTGGAGA    650

BSNT_03957___    651 AGAGCTGCATTTTGTGCAAAACTCCACAGGCGGCGTGCTCGGCCCTCAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    651 AGAGCTGCATTTTGTGCAAAACTCCACAGGCGGCGTGCTCGGCCCTCAAG    700

BSNT_03957___    701 ATTCCTGGCTGTTAATGAGAGGAATCAAAACGTTGGGACTCAGAATGGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    701 ATTCCTGGCTGTTAATGAGAGGAATCAAAACGTTGGGACTCAGAATGGAA    750

BSNT_03957___    751 GCGATCGATCAAAATGCGCGGAAAATCGCAAGCTTTCTTGAGAATCACCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    751 GCGATCGATCAAAATGCGCGGAAAATCGCAAGCTTTCTTGAGAATCACCC    800

BSNT_03957___    801 TGCTGTCCAAACGTTATATTACCCTGGTTCTTCAAATCATCCCGGACATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    801 TGCTGTCCAAACGTTATATTACCCTGGTTCTTCAAATCATCCCGGACATG    850

BSNT_03957___    851 AGCTTGCAAAAACGCAAGGATCGGGCTTTGGCGGCATGATCTCCTTTGAT    900
                     ||||||||||||||||||||.|||||||.|||||||||||||||||||||
BSU27250___yr    851 AGCTTGCAAAAACGCAAGGAGCGGGCTTCGGCGGCATGATCTCCTTTGAT    900

BSNT_03957___    901 ATTGGCAGTGAAGAACGGGTTGATGCGTTTTTAGGAAATCTGAAACTGTT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    901 ATTGGCAGTGAAGAACGGGTTGATGCGTTTTTAGGAAATCTGAAACTGTT    950

BSNT_03957___    951 TACCATTGCTGAAAGCCTGGGGGCGGTTGAAAGCTTAATTTCTGTTCCTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr    951 TACCATTGCTGAAAGCCTGGGGGCGGTTGAAAGCTTAATTTCTGTTCCTG   1000

BSNT_03957___   1001 CAAGAATGACACATGCCTCTATTCCGAGAGAACGCCGGCTTGAGCTCGGC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr   1001 CAAGAATGACACATGCCTCTATTCCGAGAGAACGCCGGCTTGAGCTCGGC   1050

BSNT_03957___   1051 ATTACGGACGGCTTGATCAGAATTTCTGTAGGAATTGAAGATGCGGAAGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27250___yr   1051 ATTACGGACGGCTTGATCAGAATTTCTGTAGGAATTGAAGATGCGGAAGA   1100

BSNT_03957___   1101 CTTGTTGGAAGATATCGGCCAAGCGCTTGAAAATATATAA   1140
                     ||||||||||||||||||||||||||||||||||||||||
BSU27250___yr   1101 CTTGTTGGAAGATATCGGCCAAGCGCTTGAAAATATATAA   1140


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