Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03940 and BSU27180

See Amino acid alignment / Visit BSNT_03940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence dna-align/BSNT_03940___yrhH.1.22522.seq
#    -bsequence dna-align/BSU27180___yrhH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03940___yrhH-BSU27180___yrhH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03940___yrhH-BSU27180___yrhH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03940___yrhH
# 2: BSU27180___yrhH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     538/543 (99.1%)
# Similarity:   538/543 (99.1%)
# Gaps:           0/543 ( 0.0%)
# Score: 2670.0
# 
#
#=======================================

BSNT_03940___      1 ATGCTAGAAAATAGACTCTATAAACGATCGGATTTTTGGAAATTATTTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr      1 ATGCTAGAAAATAGACTCTATAAACGATCGGATTTTTGGAAATTATTTTC     50

BSNT_03940___     51 TCGGAAATATAAGCTAACCAAAACAATTGAGCATATGATGATTGACTCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr     51 TCGGAAATATAAGCTAACCAAAACAATTGAGCATATGATGATTGACTCTA    100

BSNT_03940___    101 TAGATATACAAGAAAATGACAGAATTTTAGAAATTGGAATTGGAAACGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr    101 TAGATATACAAGAAAATGACAGAATTTTAGAAATTGGAATTGGAAACGGC    150

BSNT_03940___    151 ACTGTCTTTAAAAGCATAACCAAGAAACTAAAAAAGGGAAGCCTAAAAAG    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU27180___yr    151 ACTGTCTTTAAAAGCATAACCAAGAAACTAAAAAAGGGTAGCCTAAAAAG    200

BSNT_03940___    201 CATTGATCCTTCAAAACGAAAGGTAAGACAGATATCACGTGCGAATCGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr    201 CATTGATCCTTCAAAACGAAAGGTAAGACAGATATCACGTGCGAATCGAA    250

BSNT_03940___    251 AGAACATGGGGAACGGGGAGGTTTTTCATGGCTATCCAGAGGACATTCCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr    251 AGAACATGGGGAACGGGGAGGTTTTTCATGGCTATCCAGAGGACATTCCC    300

BSNT_03940___    301 TTTGATGACCGTACCTTTAATAAAGTCTTTTCTTTACATACGGTTCAAAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr    301 TTTGATGACCGTACCTTTAATAAAGTCTTTTCTTTACATACGGTTCAAAG    350

BSNT_03940___    351 CTGCACCAATATTAGGCTTGCATTAAGAGAAATTTACAGGGTGCTTCAAA    400
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr    351 CTGCACCGATATTAGGCTTGCATTAAGAGAAATTTACAGGGTGCTTCAAA    400

BSNT_03940___    401 TTGACGGCCGGTTTTATATCAGTATTGACACAAATACCGGTGAAAAAAAG    450
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU27180___yr    401 TTGACGGCCGGTTTTATATCAGTATTGACACAAATACCGGTGAAAAAGAG    450

BSNT_03940___    451 AAAACGTATATTCAACTGCTGAAAGACCAGCATTTCAGGGATCTTTCTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27180___yr    451 AAAACGTATATTCAACTGCTGAAAGACCAGCATTTCAGGGATCTTTCTGT    500

BSNT_03940___    501 TATCAGGCGTGATTCCTGTCTATGTATTATGGCTGTTAAATAA    543
                     |||||||||||.||||||||||||||||.||||||||||||||
BSU27180___yr    501 TATCAGGCGTGCTTCCTGTCTATGTATTGTGGCTGTTAAATAA    543


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