Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03938 and BSU27170

See Amino acid alignment / Visit BSNT_03938 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence dna-align/BSNT_03938___yrhI.1.22522.seq
#    -bsequence dna-align/BSU27170___bscR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03938___yrhI-BSU27170___bscR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03938___yrhI-BSU27170___bscR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03938___yrhI
# 2: BSU27170___bscR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     553/585 (94.5%)
# Similarity:   553/585 (94.5%)
# Gaps:          30/585 ( 5.1%)
# Score: 2757.0
# 
#
#=======================================

BSNT_03938___      1 ------------------------------ATGATTATGAAAGCGTCAGT     20
                                                   ||||||||||||||||||||
BSU27170___bs      1 ATGATATCCGCATCCAGCAGTAAATACGACATGATTATGAAAGCGTCAGT     50

BSNT_03938___     21 CTCACTTTTTACGGAAAGGGGTTTTGACGCTACCACTATTCCTATGATAG     70
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs     51 CTCACTTTTTACGGAAAGGGGTTTTGACGCTACCACTATTCCTATGATAG    100

BSNT_03938___     71 CTGAACGTGCTCATGTAGGGACAGGAACGATCTATCGTTATTTTGACAGC    120
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    101 CTGAACGTGCTCATGTAGGGACAGGAACGATCTATCGTTATTTTGACAGC    150

BSNT_03938___    121 AAAGAAACACTCGTTAACGTACTGTTTCAAGAAAGCATCCAGCGATTTAC    170
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    151 AAAGAAACACTCGTTAACGTACTGTTTCAAGAAAGCATCCAGCGATTTAC    200

BSNT_03938___    171 GGAAAAACTGAAGCAAGACGTTTCAGAATTGCCTGTCAGAGAAGGCTTTC    220
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    201 GGAAAAACTGAAGCAAGACGTTTCAGAATTGCCTGTCAGAGAAGGCTTTC    250

BSNT_03938___    221 ACCACGTATTTTGCTGTCTCGTTCAGTTTACGAAAGAGAGCGACTATGCG    270
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    251 ACCACGTATTTTGCTGTCTCGTTCAGTTTACGAAAGAGAGCGACTATGCG    300

BSNT_03938___    271 CTTTTTTTTCTTGAAACAAAAAAAGATGCTCATTACTTAAATCATACAAG    320
                     |||||||||||||||||.||||||||.|||||||||||||||||||||||
BSU27170___bs    301 CTTTTTTTTCTTGAAACCAAAAAAGACGCTCATTACTTAAATCATACAAG    350

BSNT_03938___    321 CAAAAAAATGATAGAAAATCTGACTCAAATGCTTGATGACTATTTTAATA    370
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    351 CAAAAAAATGATAGAAAATCTGACTCAAATGCTTGATGACTATTTTAATA    400

BSNT_03938___    371 AGGGAAAAGCGGAAGGCGTGATTCGCAGCCTGCCCTCTAATGTGTTAATT    420
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    401 AGGGAAAAGCGGAAGGCGTGATTCGCAGCCTGCCCTCTAATGTGTTAATT    450

BSNT_03938___    421 GCGATTGTATTAGGGGCGTTTCTCAAGATATATCAGCTCGTTCAAACAGG    470
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    451 GCGATTGTATTAGGGGCGTTTCTCAAGATATATCAGCTCGTTCAAACAGG    500

BSNT_03938___    471 TGATATAGAGATGGACACTGATTTAATTACTGAATTGGAACAATGCTGCT    520
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27170___bs    501 TGATATAGAGATGGACACTGATTTAATTACTGAATTGGAACAATGCTGCT    550

BSNT_03938___    521 GGGACGCCATTAAGCTTCATTCATCACAAAAATAG    555
                     |||||||||||||||||||||||||||||||||||
BSU27170___bs    551 GGGACGCCATTAAGCTTCATTCATCACAAAAATAG    585


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03938 and BSU27170

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
