Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03934 and BSU27150

See Amino acid alignment / Visit BSNT_03934 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence dna-align/BSNT_03934___yrhK.1.22522.seq
#    -bsequence dna-align/BSU27150___yrhK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03934___yrhK-BSU27150___yrhK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03934___yrhK-BSU27150___yrhK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03934___yrhK
# 2: BSU27150___yrhK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     277/294 (94.2%)
# Similarity:   277/294 (94.2%)
# Gaps:           3/294 ( 1.0%)
# Score: 1329.0
# 
#
#=======================================

BSNT_03934___      1 ATGGTGACAGTAAATGAAGAACATGACTTCCAAAAAGAGCTGAAACGATA     50
                        .|||.||.||||||||||||||||.|||||||||||.||||||||||
BSU27150___yr      1 ---ATGAAAGGAAATGAAGAACATGACATCCAAAAAGAGTTGAAACGATA     47

BSNT_03934___     51 TGAACTTTTTTTCAAAAAACGATATAAGATTCTTTATACAGTAAACGATT    100
                     |||.||||||||||||||||||||||||.|||||||||||||||||||||
BSU27150___yr     48 TGAGCTTTTTTTCAAAAAACGATATAAGGTTCTTTATACAGTAAACGATT     97

BSNT_03934___    101 TTATCATTGGTGCTTTGTTTCTCGTCGGGAGCTTTTTCTTTTTTTATGAC    150
                     |||||||.||||||.||||||||||.||.||.||||||||||||||||||
BSU27150___yr     98 TTATCATCGGTGCTATGTTTCTCGTTGGAAGTTTTTTCTTTTTTTATGAC    147

BSNT_03934___    151 CGATTAATGTCGGCAGGGATATGGCTGTTTGCGATCGGAAGTTTGCTGCT    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU27150___yr    148 CGGTTAATGTCGGCAGGGATATGGCTGTTTGCGATCGGAAGTTTGCTGCT    197

BSNT_03934___    201 GTTAATTAGGCCGACCATTCGGCTGATTCATGACTTTCATTACCGTAAGC    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU27150___yr    198 GTTAATCAGGCCGACCATTCGGCTGATTCATGACTTTCATTACCGTAAGC    247

BSNT_03934___    251 ATGTGGAACAGCAATTCAAGCATCAATCTTCAACAGATGACTGA    294
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU27150___yr    248 ATGTGGAACAGCAATTCAAGCATCAATCTTCAACAGATGACTGA    291


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.