Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03930 and BSU27130

See Amino acid alignment / Visit BSNT_03930 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_03930___yrhM.1.22522.seq
#    -bsequence dna-align/BSU27130___rsiV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03930___yrhM-BSU27130___rsiV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03930___yrhM-BSU27130___rsiV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03930___yrhM
# 2: BSU27130___rsiV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     841/858 (98.0%)
# Similarity:   841/858 (98.0%)
# Gaps:           0/858 ( 0.0%)
# Score: 4137.0
# 
#
#=======================================

BSNT_03930___      1 ATGGATAAGAGATTACAGCAATTAAGAGAAGAATATAAAAATGTTCCGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU27130___rs      1 ATGGATAAGAGATTACAGCAATTAAGAGAAGAATATAAAAATGTTCAGAT     50

BSNT_03930___     51 TCCTAAAGAATTGGATATCATTGTTGAAAAAGCCCTTCAGCAAGAACCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs     51 TCCTAAAGAATTGGATATCATTGTTGAAAAAGCCCTTCAGCAAGAACCAA    100

BSNT_03930___    101 AAAAGAAAAGAATCGTCATGTGGCCGACATCAGCAGCAATCGCTGCAGCT    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU27130___rs    101 AAAAGAAAAGAATCGTTATGTGGCCGACATCAGCAGCAATCGCTGCAGCT    150

BSNT_03930___    151 ATTTTATTCACTGCGCTTGTTAATATCAACCCTGACGCTGCTCAGGCTAT    200
                     ||||||||||||||||||||||||||||||||.|||||.|||||||||||
BSU27130___rs    151 ATTTTATTCACTGCGCTTGTTAATATCAACCCGGACGCCGCTCAGGCTAT    200

BSNT_03930___    201 GTCAAGGATCCCTGTCATCGGCAAAATCGTCAAAGCGATCACCTTTATTG    250
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    201 GTCAAAGATCCCTGTCATCGGCAAAATCGTCAAAGCGATCACCTTTATTG    250

BSNT_03930___    251 AAATCAAAGAGGAAAAAGACCAATCAAGCATTGATGTCAAAACACCTGCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    251 AAATCAAAGAGGAAAAAGACCAATCAAGCATTGATGTCAAAACACCTGCT    300

BSNT_03930___    301 TTGTCCGGGCTTTCTAATAAAGAGCTGGAAAACAGCATTAACCAAAAATA    350
                     ||||||||||||||||||||||||||.|||||||||||||||.|.|||||
BSU27130___rs    301 TTGTCCGGGCTTTCTAATAAAGAGCTTGAAAACAGCATTAACGAGAAATA    350

BSNT_03930___    351 CTTGAAAGAAAGCCAGCAGCTGTATAAAGAGTTTATACAGTCCACATCCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    351 CTTGAAAGAAAGCCAGCAGCTGTATAAAGAGTTTATACAGTCCACATCCA    400

BSNT_03930___    401 AAAACAAAAAAGGGCATCTCAGCATCTACAGTGATTACGAGACGGTCACA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    401 AAAACAAAAAAGGGCATCTCAGCATCTACAGTGATTACGAGACGGTCACA    450

BSNT_03930___    451 GACACGCCAGATTTACTCTCTATCCGGCGCAATATTGAAAAAACACAAGC    500
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU27130___rs    451 GACACGCCAGATTTACTCTCTATCCGGCGCAATATTGAAACAACACAAGC    500

BSNT_03930___    501 ATCTTCCTACACACAAAGCCGTTATATTACAATTGACAAAAAGAATGATA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    501 ATCTTCCTACACACAAAGCCGTTATATTACAATTGACAAAAAGAATGATA    550

BSNT_03930___    551 TTTTACTTACATTAAAAAGCTTATTCAAAGATGAGCGCTATATTAAAGTC    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU27130___rs    551 TTTTACTTACATTAAAAAGCTTATTCAAAGATGAGCGCTATATCAAAGTC    600

BSNT_03930___    601 ATCAGTCAAAATATTAGAGAGCAAATGAAACAGCAAATGAAGGAAGATCC    650
                     |||||||||||.||.|.|||.|||||||||||||||||||||||||||||
BSU27130___rs    601 ATCAGTCAAAACATCAAAGAACAAATGAAACAGCAAATGAAGGAAGATCC    650

BSNT_03930___    651 AAATAAAATATATTGGCTCACTGACGAAGATGCAGAACCGTTCAAAACGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    651 AAATAAAATATATTGGCTCACTGACGAAGATGCAGAACCGTTCAAAACGA    700

BSNT_03930___    701 TTCTTCCTGATCAGACGTTTTACATTACTGAAGACCATAAACTTGTGATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    701 TTCTTCCTGATCAGACGTTTTACATTACTGAAGACCATAAACTTGTGATC    750

BSNT_03930___    751 TCATTTGACGAATATGAAGTCGCCCCCGGCTATATGGGCGTTACCGAGTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU27130___rs    751 TCATTTGACGAATATGAAGTCGCCCCCGGCTATATGGGCGTTACAGAGTT    800

BSNT_03930___    801 TACAATTCCAACAAGCGTCATTTCAAACTTGCTCGTGGGAGAACGTTATA    850
                     ||||||||||||..||||||||||||||||||||||||||||||||||||
BSU27130___rs    801 TACAATTCCAACCGGCGTCATTTCAAACTTGCTCGTGGGAGAACGTTATA    850

BSNT_03930___    851 TTCGATAA    858
                     ||||||||
BSU27130___rs    851 TTCGATAA    858


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03930 and BSU27130

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
