Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03927 and BSU27110

See Amino acid alignment / Visit BSNT_03927 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_03927___yrhO.1.22522.seq
#    -bsequence dna-align/BSU27110___yrhO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03927___yrhO-BSU27110___yrhO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03927___yrhO-BSU27110___yrhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03927___yrhO
# 2: BSU27110___yrhO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     813/828 (98.2%)
# Similarity:   813/828 (98.2%)
# Gaps:           0/828 ( 0.0%)
# Score: 4005.0
# 
#
#=======================================

BSNT_03927___      1 ATGAAAGAAAATATGTTAGACATTTTAAAAAACCTCAATTTTACAGAATA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr      1 ATGAAAGAAAATATGTTAGACATTTTAAAAAACCTCAATTTTACAGAATA     50

BSNT_03927___     51 TGAATCGAAAGCGTATTTGGCATTATTGCAAGAATCACCTTTAACAGGCT    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU27110___yr     51 TGAATCGAAAGCGTATTTAGCATTATTGCAAGAATCACCTTTAACAGGCT    100

BSNT_03927___    101 ATGCCGTTGCCAAAAAATCCGGAGTTCCCCGTTCTAAAATTTATGAAGTC    150
                     |||||||||||||||||||||||||.|||||||||||||||||||||||.
BSU27110___yr    101 ATGCCGTTGCCAAAAAATCCGGAGTGCCCCGTTCTAAAATTTATGAAGTA    150

BSNT_03927___    151 TTGGAAAGCCTTGTGTTAAGGGGAGATGTTTTTGTCAGTCATGGAAATAC    200
                     ||||||||.|||||..||||||||||||||||||||||||||||||||||
BSU27110___yr    151 TTGGAAAGTCTTGTCATAAGGGGAGATGTTTTTGTCAGTCATGGAAATAC    200

BSNT_03927___    201 GCCTCAGTATGTTCCTGTCCCCGCAAAAGAACTGATTAAAAACCGCCGGC    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27110___yr    201 GCCTCAGTATGTTCCAGTCCCCGCAAAAGAACTGATTAAAAACCGCCGGC    250

BSNT_03927___    251 TCAAAGCGGAAGAGCATTTTGATCAGGCTGAGAAATATTTTGAAAAGTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr    251 TCAAAGCGGAAGAGCATTTTGATCAGGCTGAGAAATATTTTGAAAAGTTC    300

BSNT_03927___    301 GAGCAGACTGCTAATGACCGGGAAAACATCTGGAATATCACCGGCCGCAG    350
                     ||||||||.||.||||||||||||||||||||||||||||||||||||||
BSU27110___yr    301 GAGCAGACCGCAAATGACCGGGAAAACATCTGGAATATCACCGGCCGCAG    350

BSNT_03927___    351 TGAAATTCTTGAAAAGGTGAAGGCTTGTATTTTATCTGCCAAAAAAAGAA    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27110___yr    351 TGAAATTCTTGAAAAGGTGAAGGCTTGTATCTTATCTGCCAAAAAAAGAA    400

BSNT_03927___    401 TCCTCTTAGAAATATGGAAAGAGGATTTTGAGGAGATAGAAGCAGAGCTC    450
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27110___yr    401 TCCTCTTAGAAATATGGAAAGAGGATTTTAAGGAGATAGAAGCAGAGCTC    450

BSNT_03927___    451 AAACAGGCGGCAGAACAAGGCGTTATTGTCACCATTATTGCGTACGGAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr    451 AAACAGGCGGCAGAACAAGGCGTTATTGTCACCATTATTGCGTACGGAGA    500

BSNT_03927___    501 CATCGTATCTGATTTTGCCAATGTTTACCTTCATGATATGAGCAGTGAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr    501 CATCGTATCTGATTTTGCCAATGTTTACCTTCATGATATGAGCAGTGAAA    550

BSNT_03927___    551 TTACAGAAGAGTATGACGGACGGTGGCTTGTCTATAGCGGAGATGATTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr    551 TTACAGAAGAGTATGACGGACGGTGGCTTGTCTATAGCGGAGATGATTCA    600

BSNT_03927___    601 GAAGTCGTAGCGGGCATTGTCTCACTTGGCAACGACAGCCGTGCTGCATG    650
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr    601 GAAGTAGTAGCGGGCATTGTCTCACTTGGCAACGACAGCCGTGCTGCATG    650

BSNT_03927___    651 GACGATGCATGTAGGTTTAGTCATGCCTATTACTGAAGTGATCATTCATG    700
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27110___yr    651 GACGATGCATGTAGGGTTAGTCATGCCTATTACTGAAGTGATCATTCATG    700

BSNT_03927___    701 ATCTGTACCTCATGGAAATTCTGAAAAAGCATAGAGAGCTTTTAGAAGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27110___yr    701 ATCTGTACCTCATGGAAATTCTGAAAAAGCATAGAGAGCTTTTAGAAGAG    750

BSNT_03927___    751 AGCTTCGGGAAAAATCTCATCCAGTTGCGCCGTAAATTTTCTATCCATTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||.||.||
BSU27110___yr    751 AGCTTCGGGAAAAATCTCATCCAGTTGCGCCGTAAATTTTCTATTCACTC    800

BSNT_03927___    801 AGATTTCAAAAAACATTATTTGGAATAA    828
                     ||||||||||||||||||||||||||||
BSU27110___yr    801 AGATTTCAAAAAACATTATTTGGAATAA    828


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