Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03913 and BSU26990

See Amino acid alignment / Visit BSNT_03913 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_03913___yraD.1.22522.seq
#    -bsequence dna-align/BSU26990___yraD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03913___yraD-BSU26990___yraD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03913___yraD-BSU26990___yraD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03913___yraD
# 2: BSU26990___yraD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     289/300 (96.3%)
# Similarity:   289/300 (96.3%)
# Gaps:           0/300 ( 0.0%)
# Score: 1401.0
# 
#
#=======================================

BSNT_03913___      1 ATGAATCCTATCATAGAATATCTGACTGGCATGAATGTTCTGACAGACCA     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU26990___yr      1 ATGAATCCTATCATAGAATATCTGACTGGCATGAATGTTCTAACAGACCA     50

BSNT_03913___     51 AATCATCGCTATGGACTTATTAATTTCAGCAAAAAACGGAGTCAGAAATT    100
                     ||||||.||||||||||||||||||||||||||.||||||||||||||||
BSU26990___yr     51 AATCATTGCTATGGACTTATTAATTTCAGCAAAGAACGGAGTCAGAAATT    100

BSNT_03913___    101 ATGCGATGGCAGCCACTGAAGCCGGAACACCTGAAGTAAAAGAGGTCCTT    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU26990___yr    101 ATGCGATGGCAGCCACTGAAGCCGGAACGCCTGAAGTAAAAGAGGTCCTT    150

BSNT_03913___    151 ATCCGCCATTTGGAAGAAGCCCTTGATATGCACGAACAACTCTCGAGCTA    200
                     ||||||||||||||||||||.||.||||||||||||||||||||.|||||
BSU26990___yr    151 ATCCGCCATTTGGAAGAAGCACTCGATATGCACGAACAACTCTCAAGCTA    200

BSNT_03913___    201 TATGATGGAAAAAGGCTGGTACCATCCTTGGAACACTGACGAACAAGTCA    250
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU26990___yr    201 TATGATGGAAAAAGGCTGGTACCATCCTTGGAACCCTGACGAACAAGTCA    250

BSNT_03913___    251 AGCTGAATTTACAAAATATTGATACAGCGATTCAATTGCCGACCCTTTAA    300
                     |||||||||||.||||||||||||||||.|||||||||||.|||||||||
BSU26990___yr    251 AGCTGAATTTAAAAAATATTGATACAGCCATTCAATTGCCAACCCTTTAA    300


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