Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03909 and BSU26950

See Amino acid alignment / Visit BSNT_03909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_03909___yraG.1.22522.seq
#    -bsequence dna-align/BSU26950___yraG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03909___yraG-BSU26950___yraG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03909___yraG-BSU26950___yraG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03909___yraG
# 2: BSU26950___yraG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     238/246 (96.7%)
# Similarity:   238/246 (96.7%)
# Gaps:           0/246 ( 0.0%)
# Score: 1158.0
# 
#
#=======================================

BSNT_03909___      1 ATGGATCATCAAACATTAGCAGCTCACGAGGCTGTAGACTTACATGAAAT     50
                     |||||||||||||||||.||||||||.||||||||.||||||||||||||
BSU26950___yr      1 ATGGATCATCAAACATTGGCAGCTCATGAGGCTGTTGACTTACATGAAAT     50

BSNT_03909___     51 TGTGAACTTTAAAACACTTTGTATAGCGAAATCAAAGTTAATGCAAGGGC    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU26950___yr     51 CGTGAACTTTAAAACACTTTGTATAGCGAAATCAAAGTTAATGCAAGGGC    100

BSNT_03909___    101 TTGTGTTTGACCAAGAACTGAAGGACTTGATGCAAAAAGATGTGCAGCAA    150
                     ||||||||||||||||||||||||||||||||.||||||||||.||||||
BSU26950___yr    101 TTGTGTTTGACCAAGAACTGAAGGACTTGATGGAAAAAGATGTACAGCAA    150

BSNT_03909___    151 TCCATTCAAGCCCTCACTGAATTACAAGCGGTTTATGAGCGTGCCTCATT    200
                     ||||||||||.|||.|||||||||||||||||||||||||||||||||||
BSU26950___yr    151 TCCATTCAAGACCTTACTGAATTACAAGCGGTTTATGAGCGTGCCTCATT    200

BSNT_03909___    201 TCAGGCCCCTGTCCCTCAAAGCCGCCCAACGCCAATCATCAATTGA    246
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU26950___yr    201 TCAGGCCCCTGTCCCTCAAAGCCGCCCAACGCCAATCATCAATTGA    246


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.