Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03903 and BSU26900

See Amino acid alignment / Visit BSNT_03903 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence dna-align/BSNT_03903___yraL.1.22522.seq
#    -bsequence dna-align/BSU26900___yraL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03903___yraL-BSU26900___yraL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03903___yraL-BSU26900___yraL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03903___yraL
# 2: BSU26900___yraL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     260/264 (98.5%)
# Similarity:   260/264 (98.5%)
# Gaps:           0/264 ( 0.0%)
# Score: 1284.0
# 
#
#=======================================

BSNT_03903___      1 ATGGCATATGTAAAAGTAACCGCTATTTTACCTGAAAAGCTGATATCGGA     50
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU26900___yr      1 ATGGCATATGTAAAAGCAACCGCTATTTTACCTGAAAAGCTGATATCGGA     50

BSNT_03903___     51 AATTCAAAAGTATGTTCAAGGAAAAACAATATATATCCCTAAACCTGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26900___yr     51 AATTCAAAAGTATGTTCAAGGAAAAACAATATATATCCCTAAACCTGAAT    100

BSNT_03903___    101 CCTCTCATCAAAAATGGGGTGCGTGTTCAGGAACAAGAAAGCTGATCGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26900___yr    101 CCTCTCATCAAAAATGGGGTGCGTGTTCAGGAACAAGAAAGCTGATCGAT    150

BSNT_03903___    151 GACAGAAACGCTTCTATTAAAAAAGCATTTAAAAATGGCAAAACCATTCA    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU26900___yr    151 GACAGAAACGCTTCTATTAAAAAAGCATTTAAAAACGGCAAAACCATTCA    200

BSNT_03903___    201 TCAATTATCTGATGAATATCACCTCTCTGATGAAACAATAAAAAAAATTG    250
                     ||||||||||||||||||||||||||||..||||||||||||||||||||
BSU26900___yr    201 TCAATTATCTGATGAATATCACCTCTCTATTGAAACAATAAAAAAAATTG    250

BSNT_03903___    251 TCTACTCTAAATAA    264
                     ||||||||||||||
BSU26900___yr    251 TCTACTCTAAATAA    264


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