Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03896 and BSU26830

See Amino acid alignment / Visit BSNT_03896 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence dna-align/BSNT_03896___yrpE.1.22522.seq
#    -bsequence dna-align/BSU26830___yrpE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03896___yrpE-BSU26830___yrpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03896___yrpE-BSU26830___yrpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03896___yrpE
# 2: BSU26830___yrpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 756
# Identity:     750/756 (99.2%)
# Similarity:   750/756 (99.2%)
# Gaps:           0/756 ( 0.0%)
# Score: 3726.0
# 
#
#=======================================

BSNT_03896___      1 ATGAACATTTTATTTTCAAAGCGGCTAGGCATATTAACGATTGGTTCATT     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU26830___yr      1 ATGAACATTTTATTTTCAAAACGGCTAGGCATATTAACGATTGGTTCATT     50

BSNT_03896___     51 ACTAGTTTTGGCAGGATGTCAGACTTCCGGTTCTTCTGCAGGTGAGTCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr     51 ACTAGTTTTGGCAGGATGTCAGACTTCCGGTTCTTCTGCAGGTGAGTCTA    100

BSNT_03896___    101 ATAAAACAACATCATCCTCAGCAGTTGAAGAAGACTCTTCCAAAACGCAA    150
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    101 ATCAAACAACATCATCCTCAGCAGTTGAAGAAGACTCTTCCAAAACGCAA    150

BSNT_03896___    151 GAGCAAACATCTGACAGTCATACACACGAACATTCTCACGATCATAGTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    151 GAGCAAACATCTGACAGTCATACACACGAACATTCTCACGATCATAGTCA    200

BSNT_03896___    201 TGCGCATGATAAAGAAACAGAAAAAATATATGAAGGCTATTTTAAAAACA    250
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU26830___yr    201 TGCGCATGATGAAGAAACAGAAAAAATATATGAAGGCTATTTTAAAAACA    250

BSNT_03896___    251 GCCAAGTAAAGGATCGCTTACTTTCTGATTGGGAAGGAGATTGGCAATCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    251 GCCAAGTAAAGGATCGCTTACTTTCTGATTGGGAAGGAGATTGGCAATCT    300

BSNT_03896___    301 GTATATCCATACCTGCAAGATGGTACTCTTGACGAAGTGTTTTCATATAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    301 GTATATCCATACCTGCAAGATGGTACTCTTGACGAAGTGTTTTCATATAA    350

BSNT_03896___    351 ATCAGAACACGAAGGCGGCAAGACAGCTGAAGAATATAAAGAGTATTATA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    351 ATCAGAACACGAAGGCGGCAAGACAGCTGAAGAATATAAAGAGTATTATA    400

BSNT_03896___    401 AAAAGGGCTATCAAACAGATGTTGACCGTATTGTAATCCAGAAAGATACT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    401 AAAAAGGCTATCAAACAGATGTTGACCGTATTGTAATCCAGAAAGATACT    450

BSNT_03896___    451 GTAACGTTCTTCAAAAATGGACAAGAATATTCTGGTAAGTATACGTATGA    500
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU26830___yr    451 GTAACGTTCTTCAAAAATGGAAAAGAATATTCTGGTAAGTATACGTATGA    500

BSNT_03896___    501 CGGATACGAAATTCTAACCTATGATGCGGGCAATAGAGGGGTAAGATACA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    501 CGGATACGAAATTCTAACCTATGATGCGGGCAATAGAGGGGTAAGATACA    550

BSNT_03896___    551 TATTCAAACTAGCTAAAAAAGCAGAAGGGCTGCCTCAGTATATTCAGTTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    551 TATTCAAACTAGCTAAAAAAGCAGAAGGGCTGCCTCAGTATATTCAGTTT    600

BSNT_03896___    601 AGTGATCATAGTATTTACCCGACTAAAGCTAGTCATTACCATCTCTATTG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    601 AGTGATCATAGTATTTACCCGACTAAAGCTAGTCATTACCATCTCTATTG    650

BSNT_03896___    651 GGGGGACGACCGTGAAGCTTTACTTGATGAAGTCAAAAACTGGCCTACCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU26830___yr    651 GGGGGACGACCGTGAAGCTTTACTTGATGAAGTCAAAAACTGGCCTACTT    700

BSNT_03896___    701 ACTACCCGTCAAAAATGGATGGACACGATATTGCCCATGAGATGATGGCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26830___yr    701 ACTACCCGTCAAAAATGGATGGACACGATATTGCCCATGAGATGATGGCT    750

BSNT_03896___    751 CATTAA    756
                     ||||||
BSU26830___yr    751 CATTAA    756


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03896 and BSU26830

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
