Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03882 and BSU26730

See Amino acid alignment / Visit BSNT_03882 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_03882___yrdF.1.22522.seq
#    -bsequence dna-align/BSU26730___yrdF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03882___yrdF-BSU26730___yrdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03882___yrdF-BSU26730___yrdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03882___yrdF
# 2: BSU26730___yrdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     256/276 (92.8%)
# Similarity:   256/276 (92.8%)
# Gaps:           0/276 ( 0.0%)
# Score: 1200.0
# 
#
#=======================================

BSNT_03882___      1 ATGAGAAAAATAATGATAGATGGAAGAGACTTTGAAAATATTGAAGTTTT     50
                     ||||||||||||||.||||||||||||||||||||||||||.||||||||
BSU26730___yr      1 ATGAGAAAAATAATAATAGATGGAAGAGACTTTGAAAATATAGAAGTTTT     50

BSNT_03882___     51 ACATGATGTTTTAAAAGATAAATTAGACTTCCCAGACTACTATGGAGGAA    100
                     ||||||||.|||||||||||||.||||||||||||||||||||||..|||
BSU26730___yr     51 ACATGATGATTTAAAAGATAAACTAGACTTCCCAGACTACTATGGGAGAA    100

BSNT_03882___    101 ATTTAGACGCTTTATGGGATTGCCTGACAGGGTGGGTGGATTTGCCGCTT    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU26730___yr    101 ATTTAGACGCTTTATGGGATTGCCTGACAGGGTGGGTGGATTTGCCGCTC    150

BSNT_03882___    151 ACTTTAGTCTTGATAAATTTTGAGTTTAGTAAAAAGTTTTTAGGTTCATA    200
                     |||||||||||||.||||||||||||.||.||.|..||||||||||||||
BSU26730___yr    151 ACTTTAGTCTTGAAAAATTTTGAGTTCAGCAATACATTTTTAGGTTCATA    200

BSNT_03882___    201 CGCTAATGATGTATTAGAAGTTTTACAAGAGGCTCAAGAGGAATTAAAGG    250
                     ||||.|.|||||||||||||||.||||||||||||||||.|||.||||||
BSU26730___yr    201 CGCTGACGATGTATTAGAAGTTATACAAGAGGCTCAAGAAGAACTAAAGG    250

BSNT_03882___    251 ACGAGTTTAAAATAATAATAGAATAG    276
                     ||||.|||||||||||||||||.|||
BSU26730___yr    251 ACGAATTTAAAATAATAATAGAGTAG    276


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