Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03880 and BSU26710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_03880___azlC.1.22522.seq
# -bsequence dna-align/BSU26710___azlC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03880___azlC-BSU26710___azlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03880___azlC-BSU26710___azlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03880___azlC
# 2: BSU26710___azlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity: 703/765 (91.9%)
# Similarity: 703/765 (91.9%)
# Gaps: 51/765 ( 6.7%)
# Score: 3442.5
#
#
#=======================================
BSNT_03880___ 1 TTGAATAAAAATAAAGAATCGTTACATTTAAGCTCTCCTGCTATAAACAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 1 TTGAATAAAAATAAAGAATCGTTACATTTAAGCTCTCCTGCTATAAACAC 50
BSNT_03880___ 51 TCATATGAATAAGAGAGGTCAAATATGGGCTGCATTTCGTTCTGCATTCC 100
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU26710___az 51 TCATATGAATAAGAGAAGTCAAATATGGGCTGCATTTCGTTCTGCATTCC 100
BSNT_03880___ 101 CATATACAATTCCGATTTTTGCGGGGTTTTTGTTTTTGGGGATAGCTTAT 150
|||||||.|||||||||||||||||||||||.||||||||||||||||||
BSU26710___az 101 CATATACCATTCCGATTTTTGCGGGGTTTTTATTTTTGGGGATAGCTTAT 150
BSNT_03880___ 151 GGAATCTTTATGCATTCTTTGGGATTTAGCGCAATCTATCCAATCATCAT 200
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 151 GGGATCTTTATGCATTCTTTGGGATTTAGCGCAATCTATCCAATCATCAT 200
BSNT_03880___ 201 GAGTTTTATGATATTTGCGGGCTCAATGGAGTTTGTTGCAGCGAATTTTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 201 GAGTTTTATGATATTTGCGGGCTCAATGGAGTTTGTTGCAGCGAATTTTT 250
BSNT_03880___ 251 TACTTGGTGCGTTCAACCCTATGAATGCTCTTTTTTTGACGTTAATGGTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 251 TACTTGGTGCGTTCAACCCTATGAATGCTCTTTTTTTGACGTTAATGGTC 300
BSNT_03880___ 301 AATGCCAGGCATTTGTTTTATGGAATTTCCATGTTGGATAAGTACAGGGG 350
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 301 AATGCCCGGCATTTGTTTTATGGAATTTCCATGTTGGATAAGTACAGGGG 350
BSNT_03880___ 351 GACTGGAAAGAAAAAGCTTTATCTGATTTTCGGAATGTGTGATGAATCAT 400
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU26710___az 351 GACTGGAAAGAAAAAGCTTTATCTGATTTTCGGAATGTGCGATGAATCAT 400
BSNT_03880___ 401 TTTCTATCAATTATACCGCTAATGTTCCGGCGAATGTTGACAAGGGCTGG 450
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU26710___az 401 TTTCTATCAATTATACCGCTAATGTTCCGGCGAATGTTGATAAGGGCTGG 450
BSNT_03880___ 451 TTTATGTTTTTTGTGACACTGCTTAATCATTTATATTGGGTCGCGGGGGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 451 TTTATGTTTTTTGTGACACTGCTTAATCATTTATATTGGGTCGCGGGGGC 500
BSNT_03880___ 501 TGCGATAGGAGGTATT---------------------------------- 516
.|||||||||||||||
BSU26710___az 501 AGCGATAGGAGGTATTTTTGGGTCGTACGTGAAGTTTAATACCGAAGGGC 550
BSNT_03880___ 517 ----TTTTGTGATGACTGCTCTGTTTATTGTGATATTCATAGAACAATGG 562
||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 551 TTGATTTTGTGATGACTGCTCTGTTTATTGTGATATTCATAGAACAATGG 600
BSNT_03880___ 563 ATGAAAGAGAAAAAGCATTACAGTGCTCTCACAGGACTTGGGCTTTCAGT 612
||||||||||||||||||||||||||||||||.||||||||.||||||||
BSU26710___az 601 ATGAAAGAGAAAAAGCATTACAGTGCTCTCACGGGACTTGGACTTTCAGT 650
BSNT_03880___ 613 AGCCAGTCTTATTCTTTTTGGCGGAAACCAATTTATTATTCCTGCTATGC 662
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU26710___az 651 AGCCAGTCTTATCCTTTTTGGCGGAAACCAATTTATTATTCCTGCTATGC 700
BSNT_03880___ 663 TCGCCATTTTAGGGGTACTGACTGTTCTGAGAAAACCATTGGAGAAAGCT 712
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26710___az 701 TCGCCATTTTAGGGGTACTGACTGTTCTGAGAAAACCATTGGAGAAAGCT 750
BSNT_03880___ 713 GA------------- 714
||
BSU26710___az 751 GAGGTTTCCGTATGA 765
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