Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03878 and BSU26700

See Amino acid alignment / Visit BSNT_03878 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_03878___azlD.1.22522.seq
#    -bsequence dna-align/BSU26700___azlD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03878___azlD-BSU26700___azlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03878___azlD-BSU26700___azlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03878___azlD
# 2: BSU26700___azlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     325/333 (97.6%)
# Similarity:   325/333 (97.6%)
# Gaps:           0/333 ( 0.0%)
# Score: 1593.0
# 
#
#=======================================

BSNT_03878___      1 ATGACGATGACTATGACGCAGCAAATAATCACCATTGCAATGGTCGTGCT     50
                     ||||||||||||||||||||||||||.||||||||.||||||||||||||
BSU26700___az      1 ATGACGATGACTATGACGCAGCAAATGATCACCATCGCAATGGTCGTGCT     50

BSNT_03878___     51 AGGAACAATGCTGACACGGTTCCTTCCATTCATGATTTTCCCGTCTGGCA    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU26700___az     51 TGGAACAATGCTGACACGGTTCCTTCCATTCATGATTTTCCCGTCTGGCA    100

BSNT_03878___    101 AACCGACACCGAAATATGTACAGTATCTTGGTAAAGTGCTGCCATCAGCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26700___az    101 AACCGACACCGAAATATGTACAGTATCTTGGTAAAGTGCTGCCATCAGCG    150

BSNT_03878___    151 GTAATCGGGCTTTTGGTCATTTATTGTTTAAAAGATGTGAGTCTGCTTTC    200
                     ||||||||||||||.||||||||||||||.||||||||||||||.|||||
BSU26700___az    151 GTAATCGGGCTTTTAGTCATTTATTGTTTGAAAGATGTGAGTCTACTTTC    200

BSNT_03878___    201 TGGAAGTCATGGCATTCCTGAATTAGTTGGAGCAGCTGCAGTTGTACTGC    250
                     ||||||||||||||||||||||||.||||||||||||||.||||||||||
BSU26700___az    201 TGGAAGTCATGGCATTCCTGAATTGGTTGGAGCAGCTGCTGTTGTACTGC    250

BSNT_03878___    251 TTCACTTGTGGAAGAAAAATATGCTTCTTTCCATAGCGGGGGGAACCGTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26700___az    251 TTCACTTGTGGAAGAAAAATATGCTTCTTTCCATAGCGGGGGGAACCGTT    300

BSNT_03878___    301 GTTTATATGGTTTTGGTGCAATTGGTTTTTTAA    333
                     |||||||||||||||||||||||||||||||||
BSU26700___az    301 GTTTATATGGTTTTGGTGCAATTGGTTTTTTAA    333


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