Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03876 and BSU26690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_03876___brnQ.1.22522.seq
# -bsequence dna-align/BSU26690___brnQ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03876___brnQ-BSU26690___brnQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03876___brnQ-BSU26690___brnQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03876___brnQ
# 2: BSU26690___brnQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1323
# Identity: 1298/1323 (98.1%)
# Similarity: 1298/1323 (98.1%)
# Gaps: 0/1323 ( 0.0%)
# Score: 6390.0
#
#
#=======================================
BSNT_03876___ 1 ATGTCAAAAAAAGTGTCTGCTTCCTATATCATCATTATAGGATTAATGCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 1 ATGTCAAAAAAAGTGTCTGCTTCCTATATCATCATTATAGGATTAATGCT 50
BSNT_03876___ 51 ATTTGCATTGTTTTTTGGAGCAGGAAATCTCATTTTTCCGCCTATGCTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 51 ATTTGCATTGTTTTTTGGAGCAGGAAATCTCATTTTTCCGCCTATGCTTG 100
BSNT_03876___ 101 GTCAAATGGCTGGAAAAAATGTATGGATCGCTAATGCAGGTTTCTTAGTG 150
|||||.||||.||.||||||||||||.|||||||||||||||||||||||
BSU26690___br 101 GTCAATTGGCCGGGAAAAATGTATGGGTCGCTAATGCAGGTTTCTTAGTG 150
BSNT_03876___ 151 ACCGGAGTTGGATTGCCATTACTGGCTATAACAGCATTTGTTTTTTCGGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 151 ACCGGAGTTGGATTGCCATTACTGGCTATAACAGCATTTGTTTTTTCGGG 200
BSNT_03876___ 201 TAAACAAAACTTACAGTCGTTAGTCAGCCGTGTTCACCCGGTGTTTGGCA 250
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU26690___br 201 TAAACAAAACTTACAGTCGTTAGCCAGCCGTGTTCACCCGGTGTTTGGCA 250
BSNT_03876___ 251 TTGTATTTACGACGATTCTCTATTTGGCAATCGGGCCTTTTTTCGCTATC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 251 TTGTATTTACGACGATTCTCTATTTGGCAATCGGGCCTTTTTTCGCTATC 300
BSNT_03876___ 301 CCGAGATCAGGAAACGTATCGTTTGAAATTGGGGTAAAACCTTTTTTATC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 301 CCGAGATCAGGAAACGTATCGTTTGAAATTGGGGTAAAACCTTTTTTATC 350
BSNT_03876___ 351 AAATGATGCAGGCCCTGTCTCATTGATCATATTTACAATATTATTTTTCG 400
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU26690___br 351 AAATGATGCAAGCCCTGTCTCATTGATCATATTTACAATATTATTTTTCG 400
BSNT_03876___ 401 GATTGGCATGCTTGTTATCACTTAATCCTTCAAAAATCATTGATATAGTT 450
.|||||||||||||||||||||.|||||||||||||||||||||||||||
BSU26690___br 401 CATTGGCATGCTTGTTATCACTCAATCCTTCAAAAATCATTGATATAGTT 450
BSNT_03876___ 451 GGAAAATTTTTGACGCCAATTAAGCTGACATTTATCGGATTGCTTGTAGT 500
||.||||||||||||||||||||||||||||||||||||||||||||||.
BSU26690___br 451 GGTAAATTTTTGACGCCAATTAAGCTGACATTTATCGGATTGCTTGTAGC 500
BSNT_03876___ 501 GGTAGCTCTTATTCGCCCAATTGGAACCATTCAAGCACCATCAAAAGGGT 550
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 501 CGTAGCTCTTATTCGCCCAATTGGAACCATTCAAGCACCATCAAAAGGGT 550
BSNT_03876___ 551 ACACATCACAAGCGTTTTTTAAAGGATTTCAGGAAGGATACCTTACTCTG 600
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU26690___br 551 ACACATCACAAGCGTTTTTTAAAGGATTTCAGGAAGGATACCTCACTCTG 600
BSNT_03876___ 601 GATGCTCTTGTAGCATTTGTTTTTGGAATTATCATCGTGAATGCATTGAA 650
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 601 GATGCCCTTGTAGCATTTGTTTTTGGAATTATCATCGTGAATGCATTGAA 650
BSNT_03876___ 651 AGAACAAGGAGCTTTTACCAAAAAACAGCTGATGGGTGTTTGTGCAAAAG 700
||||||||||||||.||||||||||||||||||.|.||||||||||||||
BSU26690___br 651 AGAACAAGGAGCTTCTACCAAAAAACAGCTGATAGTTGTTTGTGCAAAAG 700
BSNT_03876___ 701 CAGCCGCGATTGCAGCTGTACTCTTAGCAGTTATGTATACAGCCCTTTCC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 701 CAGCCGCGATTGCAGCTGTACTCTTAGCAGTTATGTATACAGCCCTTTCC 750
BSNT_03876___ 751 TATATGGGGGCTTCCAGCGTTGAAGAACTGGGGATTTTAGAAAATGGAGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 751 TATATGGGGGCTTCCAGCGTTGAAGAACTGGGGATTTTAGAAAATGGAGC 800
BSNT_03876___ 801 AGAGGTCTTGGCTAAGGTTTCATCCTATTATTTTGGATCTTATGGTTCAA 850
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 801 AGAGGTTTTGGCTAAGGTTTCATCCTATTATTTTGGATCTTATGGTTCAA 850
BSNT_03876___ 851 TCTTATTGGGCTTAATGATTACAGTGGCGTGTCTGACGACAAGTGTCGGA 900
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU26690___br 851 TCTTATTGGGCTTAATGATTACAGTGGCGTGTCTGACGACAAGTGTCGGG 900
BSNT_03876___ 901 CTGATCACAGCGTGTTCTTCATTTTTTCATGAATTATTTCCGAACATTTC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 901 CTGATCACAGCGTGTTCTTCATTTTTTCATGAATTATTTCCGAACATTTC 950
BSNT_03876___ 951 TTATAAAAAAATTGCTGTCGTTTTATCAGTGTTTAGTACACTTGTCGCAA 1000
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU26690___br 951 TTATAAAAAAATTGCTGTCGTTTTATCAGTGTTTAGTACGCTTGTCGCAA 1000
BSNT_03876___ 1001 ATATAGGATTAACCCAGCTCATTAAGGTGTCAATGCCTGTCTTACTGACG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 1001 ATATAGGATTAACCCAGCTCATTAAGGTGTCAATGCCTGTCTTACTGACG 1050
BSNT_03876___ 1051 ATGTATCCTATCGCGATTTCCTTAATATTTTTAACGTTTTTGCATTCTGT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 1051 ATGTATCCTATCGCGATTTCCTTAATATTTTTAACGTTTTTGCATTCTGT 1100
BSNT_03876___ 1101 ATTTAAAGGGAAGACAGAAGTGTATCAAGGCAGTTTATTATTCGCATTCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26690___br 1101 ATTTAAAGGGAAGACAGAAGTGTATCAAGGCAGTTTATTATTCGCATTCA 1150
BSNT_03876___ 1151 TCATCAGCTTATTTGACGGTTTGAAGGAGGCGGGAATAAAAATTGAAGTT 1200
||||||||.||||||||||||||||||.|||.||||||||||||||||||
BSU26690___br 1151 TCATCAGCCTATTTGACGGTTTGAAGGCGGCTGGAATAAAAATTGAAGTT 1200
BSNT_03876___ 1201 GTGAATCATATTTTCACTCAGATTCTACCTATGTATAACATAGGGCTGGG 1250
|||||||.||||||||||||||||||.|||||||||||||||||||||||
BSU26690___br 1201 GTGAATCGTATTTTCACTCAGATTCTTCCTATGTATAACATAGGGCTGGG 1250
BSNT_03876___ 1251 GTGGCTCATTCCAGCTATTGCAGGGGGAATATGCGGCTATATACTGAGTA 1300
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU26690___br 1251 GTGGCTCATTCCAGCTATTGCAGGAGGAATATGCGGCTATATACTGAGTA 1300
BSNT_03876___ 1301 TATTCCGAACAAAAACAAGTTGA 1323
|||||||||||||||||||||||
BSU26690___br 1301 TATTCCGAACAAAAACAAGTTGA 1323
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