Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03868 and BSU26610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_03868___yrkA.1.22522.seq
# -bsequence dna-align/BSU26610___yrkA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03868___yrkA-BSU26610___yrkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03868___yrkA-BSU26610___yrkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03868___yrkA
# 2: BSU26610___yrkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1305
# Identity: 1294/1305 (99.2%)
# Similarity: 1294/1305 (99.2%)
# Gaps: 0/1305 ( 0.0%)
# Score: 6426.0
#
#
#=======================================
BSNT_03868___ 1 TTGACAACCATTAACCTTATAATCTTTACTATTTTAATTGTCTTAACAGC 50
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU26610___yr 1 TTGACAACCATTAACCTTATAATCTTTACTCTTTTAATTGTCTTAACAGC 50
BSNT_03868___ 51 ATTTTTTGTTGCGACTGAATTTGCGATAGTAAAGATCAGGTCATCAAAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 51 ATTTTTTGTTGCGACTGAATTTGCGATAGTAAAGATCAGGTCATCAAAAA 100
BSNT_03868___ 101 TTGACCAACTCATATTAGAGGGAAAAAAAGGTGCCGTATCAGCCAAAAAG 150
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU26610___yr 101 TTGACCAACTCATATTAGAGGGAAAAAAAGGTGCCATATCAGCCAAAAAG 150
BSNT_03868___ 151 GTCATTACTCATTTGGACGAATATTTGTCAGCTTGTCAATTAGGGATCAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 151 GTCATTACTCATTTGGACGAATATTTGTCAGCTTGTCAATTAGGGATCAC 200
BSNT_03868___ 201 GGTTACAGCGTTGGGAATTGGCTGGGTCGGAGAATCGACTTTTGAAGTGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 201 GGTTACAGCGTTGGGAATTGGCTGGGTCGGAGAATCGACTTTTGAAGTGA 250
BSNT_03868___ 251 TTCTGCACCCCTTATTTGCTCATTTTCATGTAAGTGAAACAGTCTCACAT 300
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 251 TTTTGCACCCCTTATTTGCTCATTTTCATGTAAGTGAAACAGTCTCACAT 300
BSNT_03868___ 301 GTATTGATCTTAGTGATTGCTTTTGTGATGGCGACTTTTTTGCACGTTGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 301 GTATTGATCTTAGTGATTGCTTTTGTGATGGCGACTTTTTTGCACGTTGT 350
BSNT_03868___ 351 AGTTGGAGAACTTGCTCCTAAAACACTCGCTATCCAAAAAGCGGAAACCA 400
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 351 AGTTGGAGAGCTTGCTCCTAAAACACTCGCTATCCAAAAAGCGGAAACCA 400
BSNT_03868___ 401 TCACTCTTTTGACTGCAAAGCCAATTATTTGGTTTTACCGCATCCTGTTC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 401 TCACTCTTTTGACTGCAAAGCCAATTATTTGGTTTTACCGCATCCTGTTC 450
BSNT_03868___ 451 CCTTTTATATGGTTTTTAAATGGTTCAGCCCGGTTTATAGTAGGACTCTT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 451 CCTTTTATATGGTTTTTAAATGGTTCAGCCCGGTTTATAGTAGGACTCTT 500
BSNT_03868___ 501 CGGTTTGAAACCTGCATCAGAACATGAACTTGCTCATTCTGAAGAAGAAC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 501 CGGTTTGAAACCTGCATCAGAACATGAACTTGCTCATTCTGAAGAAGAAC 550
BSNT_03868___ 551 TGCGCATCTTACTGTCTGAAAGCTATAAGAGCGGTGAAATCAATCAAAAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 551 TGCGCATCTTACTGTCTGAAAGCTATAAGAGCGGTGAAATCAATCAAAAT 600
BSNT_03868___ 601 GAGTTGAAATATGTAAATAATATTTTTGAATTTGATGAAAGAATCGCCAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 601 GAGTTGAAATATGTAAATAATATTTTTGAATTTGATGAAAGAATCGCCAA 650
BSNT_03868___ 651 AGAAATTATGATTCCGAGAAGAGAGATCGTAGCGATTTCTAGTGAGGATT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 651 AGAAATTATGATTCCGAGAAGAGAGATCGTAGCGATTTCTAGTGAGGATT 700
BSNT_03868___ 701 CTTATGAAACTATTGTTAAGACCATTAAGACAGAGAGTTATACAAGGTAC 750
|||||||||||||||||||||.|||||||||||||||.||||||||||||
BSU26610___yr 701 CTTATGAAACTATTGTTAAGATCATTAAGACAGAGAGCTATACAAGGTAC 750
BSNT_03868___ 751 CCAGTCCTAAATGGAGATAAAGATTCAATCATTGGTTTTATCAATGCTAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 751 CCAGTCCTAAATGGAGATAAAGATTCAATCATTGGTTTTATCAATGCTAA 800
BSNT_03868___ 801 AGAATTCTTGTCAGCTTATATTGACACAGACCAGAAGATAAAAGAGGATT 850
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 801 AGAATTTTTGTCAGCTTATATTGACACAGACCAGAAGATAAAAGAGGATT 850
BSNT_03868___ 851 TCAAGTTAGAAAATCATATCAACCCTGTTATCCATGTTATTGAATCCGTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 851 TCAAGTTAGAAAATCATATCAACCCTGTTATCCATGTTATTGAATCCGTT 900
BSNT_03868___ 901 CCAATTCATGATTTATTGGTAAAAATGCAAAAAGAGCGAACACATATCGC 950
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU26610___yr 901 CCAATTCATGATGTATTGGTAAAAATGCAAAAAGAGCGAACACATATCGC 950
BSNT_03868___ 951 TATTCTTGTGGATGAATATGGCGGAACTTCAGGTTTAGTCACTGCTGAAG 1000
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU26610___yr 951 TATTCTTGTGGATGAATATGGCGGCACTTCAGGTTTAGTCACTGCTGAAG 1000
BSNT_03868___ 1001 ATATTCTTGAAGAAATTGTCGGGGAAATCAGAGATGAATTTGATAAAGAT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 1001 ATATTCTTGAAGAAATTGTCGGGGAAATCAGAGATGAATTTGATAAAGAT 1050
BSNT_03868___ 1051 GAAGTGCCTAATATTAGAAAAGTAAATGATAATCACTATATCTTAGATTC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 1051 GAAGTGCCTAATATTAGAAAAGTAAATGATAATCACTATATCTTAGATTC 1100
BSNT_03868___ 1101 GAAAGTGCTCATTGAAGATGTAAATGATTTATTGGGAACGACGTTAGCAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 1101 GAAAGTGCTCATTGAAGATGTAAATGATTTATTGGGAACGACGTTAGCAA 1150
BSNT_03868___ 1151 GTGACGAAGTGGATACAATAGGCGGCTGGTTTATGACTCAACAAATAGAC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 1151 GTGACGAAGTGGATACAATAGGCGGCTGGTTTATGACTCAACAAATAGAC 1200
BSNT_03868___ 1201 GCTGCAGTTGGGTCCGTTATAGAAGCCGATGGGTATATTTTTAAAGTGTA 1250
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU26610___yr 1201 GCTGCAGTTGGGTCCGTTATAGAAGCCGATGGGTATATTTTTAAAGTGCA 1250
BSNT_03868___ 1251 CAAAACAGTTGGCCGGCATATTAATTATTTAGAAATTGTCCGGAAAAAAG 1300
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU26610___yr 1251 CGAAACAGTTGGCCGGCATATTAATTATTTAGAAATTGTCCGGAAAAAAG 1300
BSNT_03868___ 1301 AATAA 1305
|||||
BSU26610___yr 1301 AATAA 1305
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