Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03865 and BSU26580

See Amino acid alignment / Visit BSNT_03865 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_03865___bltR.1.22522.seq
#    -bsequence dna-align/BSU26580___bltR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03865___bltR-BSU26580___bltR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03865___bltR-BSU26580___bltR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03865___bltR
# 2: BSU26580___bltR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     820/822 (99.8%)
# Similarity:   820/822 (99.8%)
# Gaps:           0/822 ( 0.0%)
# Score: 4092.0
# 
#
#=======================================

BSNT_03865___      1 ATGAGCGAAGATGTTAAGAAGTATTTCACAACAGGGGAGTTTTCGAAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl      1 ATGAGCGAAGATGTTAAGAAGTATTTCACAACAGGGGAGTTTTCGAAGCT     50

BSNT_03865___     51 CTGCCGTGTAAAAAAACAAACCTTATTTCATTATGATGAGATTGGTCTTT    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU26580___bl     51 CTGCCGTGTAAAAAAACAAACTTTATTTCATTATGATGAGATTGGTCTTT    100

BSNT_03865___    101 TCTCGCCGGAAATAAAAAAAGAAAATGGGTATAGATATTATTCCTATCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    101 TCTCGCCGGAAATAAAAAAAGAAAATGGGTATAGATATTATTCCTATCAT    150

BSNT_03865___    151 CAATTTGAGATTTTTCAAGTCATCAGTCTATTTAAAGAGCTTGGGGTTCC    200
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU26580___bl    151 CAATTTGAGACTTTTCAAGTCATCAGTCTATTTAAAGAGCTTGGGGTTCC    200

BSNT_03865___    201 ATTAAAAGAAATAAAGTGTCTAATAAAAGGAAAAACACCAGACAAGATCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    201 ATTAAAAGAAATAAAGTGTCTAATAAAAGGAAAAACACCAGACAAGATCC    250

BSNT_03865___    251 TGCATGTTCTAAAAGAAAAGTCTATTGAGATTGATAAAAAAATAAATGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    251 TGCATGTTCTAAAAGAAAAGTCTATTGAGATTGATAAAAAAATAAATGAG    300

BSNT_03865___    301 CTTAAGCAGTTGCAAACGATCTTACAAACAAAAGTGACGCTTACAGAACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    301 CTTAAGCAGTTGCAAACGATCTTACAAACAAAAGTGACGCTTACAGAACA    350

BSNT_03865___    351 AGCACTTGAGACTGATTTTTCCTCAATTTCTTTTGAATATTTAAATGAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    351 AGCACTTGAGACTGATTTTTCCTCAATTTCTTTTGAATATTTAAATGAAG    400

BSNT_03865___    401 AAACATTCATGTTAAGCCGAAAAACATTAAACTTACCAGAACGAAAATAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    401 AAACATTCATGTTAAGCCGAAAAACATTAAACTTACCAGAACGAAAATAT    450

BSNT_03865___    451 GTGGCAGCCATTTCAGAACTCATTCATGAAGTTCAGCAATATGAATTAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    451 GTGGCAGCCATTTCAGAACTCATTCATGAAGTTCAGCAATATGAATTAGA    500

BSNT_03865___    501 TGAAGGATATCCGATAGGCGGAATCTTTGCACGGGAACAAATCTTAGAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    501 TGAAGGATATCCGATAGGCGGAATCTTTGCACGGGAACAAATCTTAGAAA    550

BSNT_03865___    551 AAGACTTCTACAATTACAGTTACTTTTATATAAAAGTAAAAGATGGGGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    551 AAGACTTCTACAATTACAGTTACTTTTATATAAAAGTAAAAGATGGGGCA    600

BSNT_03865___    601 GAGAACATAAATTATCATGTACGGCCAAAAGGCCTGTATGCAGTTGGATA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    601 GAGAACATAAATTATCATGTACGGCCAAAAGGCCTGTATGCAGTTGGATA    650

BSNT_03865___    651 TGAAATAGGCGGAAATACTGAAGAGGCGTACCGGAGAATCATTGAGTTCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    651 TGAAATAGGCGGAAATACTGAAGAGGCGTACCGGAGAATCATTGAGTTCA    700

BSNT_03865___    701 TTGAAAGAAATGGAATGCAAATAGGGGAAAATGCATATGAGGAATATATG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    701 TTGAAAGAAATGGAATGCAAATAGGGGAAAATGCATATGAGGAATATATG    750

BSNT_03865___    751 CTGGATGAGATGGTAGTTGACGGGTATGAAAATACATATGCAAAAATCCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26580___bl    751 CTGGATGAGATGGTAGTTGACGGGTATGAAAATACATATGCAAAAATCCT    800

BSNT_03865___    801 CCTTCAAGTTAAAGAGGTGTAA    822
                     ||||||||||||||||||||||
BSU26580___bl    801 CCTTCAAGTTAAAGAGGTGTAA    822


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