Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03821 and BSU25690
See
Amino acid alignment /
Visit
BSNT_03821 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_03821.1.22522.seq
# -bsequence dna-align/BSU25690___sda.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03821-BSU25690___sda.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03821-BSU25690___sda.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03821
# 2: BSU25690___sda
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity: 140/159 (88.1%)
# Similarity: 140/159 (88.1%)
# Gaps: 18/159 (11.3%)
# Score: 696.0
#
#
#=======================================
BSNT_03821 1 ------------------ATGAGAAAACTGTCTGATGAATTACTAATAGA 32
||||||||||||||||||||||||||||||||
BSU25690___sd 1 ATTAATTGGGTTCCTAGCATGAGAAAACTGTCTGATGAATTACTAATAGA 50
BSNT_03821 33 ATCTTATTTCAAAGCCACCGAAATGAATTTAAACCGTGACTTTATCGAGT 82
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU25690___sd 51 ATCTTATTTCAAAGCCACCGAAATGAATTTAAACCGTGACTTTATTGAGT 100
BSNT_03821 83 TAATTGAAAACGAAATAAAAAGAAGATCGCTCGGACATATTATTTCCGTA 132
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25690___sd 101 TAATTGAAAACGAAATAAAAAGAAGATCGCTCGGACATATTATTTCCGTA 150
BSNT_03821 133 TCTTCTTAA 141
|||||||||
BSU25690___sd 151 TCTTCTTAA 159
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.