Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03816 and BSU25640

See Amino acid alignment / Visit BSNT_03816 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence dna-align/BSNT_03816___nadD.1.22522.seq
#    -bsequence dna-align/BSU25640___yqeJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03816___nadD-BSU25640___yqeJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03816___nadD-BSU25640___yqeJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03816___nadD
# 2: BSU25640___yqeJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity:     568/570 (99.6%)
# Similarity:   568/570 (99.6%)
# Gaps:           0/570 ( 0.0%)
# Score: 2832.0
# 
#
#=======================================

BSNT_03816___      1 ATGAAGAAAATCGGAATTTTCGGAGGCACGTTTGACCCTCCGCATAATGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq      1 ATGAAGAAAATCGGAATTTTCGGAGGCACGTTTGACCCTCCGCATAATGG     50

BSNT_03816___     51 TCACCTCTTAATGGCGAATGAGGTGCTGTACCAGGCGGGGCTTGATGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq     51 TCACCTCTTAATGGCGAATGAGGTGCTGTACCAGGCGGGGCTTGATGAAA    100

BSNT_03816___    101 TTTGGTTTATGCCTAATCAAATTCCGCCGCATAAACAGAACGAAGACTAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    101 TTTGGTTTATGCCTAATCAAATTCCGCCGCATAAACAGAACGAAGACTAT    150

BSNT_03816___    151 ACCGACAGCTTTCATCGCGTGGAAATGCTAAAGCTTGCAATTCAATCTAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    151 ACCGACAGCTTTCATCGCGTGGAAATGCTAAAGCTTGCAATTCAATCTAA    200

BSNT_03816___    201 TCCGTCCTTTAAGCTGGAGCTTGTTGAAATGGAAAGAGAAGGACCGTCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||.||.||||
BSU25640___yq    201 TCCGTCCTTTAAGCTGGAGCTTGTTGAAATGGAAAGAGAAGGGCCATCAT    250

BSNT_03816___    251 ATACCTTTGATACCGTTTCTTTACTGAAGCAGCGTTATCCAAATGATCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    251 ATACCTTTGATACCGTTTCTTTACTGAAGCAGCGTTATCCAAATGATCAG    300

BSNT_03816___    301 CTGTTCTTTATTATCGGCGCTGATATGATTGAATATTTGCCGAAATGGTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    301 CTGTTCTTTATTATCGGCGCTGATATGATTGAATATTTGCCGAAATGGTA    350

BSNT_03816___    351 TAAGCTGGACGAGCTGCTGAACCTCATTCAATTTATTGGAGTAAAGCGCC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    351 TAAGCTGGACGAGCTGCTGAACCTCATTCAATTTATTGGAGTAAAGCGCC    400

BSNT_03816___    401 CCGGTTTTCATGTTGAAACCCCTTATCCGCTTCTCTTTGCAGACGTTCCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    401 CCGGTTTTCATGTTGAAACCCCTTATCCGCTTCTCTTTGCAGACGTTCCG    450

BSNT_03816___    451 GAATTTGAGGTATCATCAACTATGATAAGGGAACGGTTTAAAAGCAAGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    451 GAATTTGAGGTATCATCAACTATGATAAGGGAACGGTTTAAAAGCAAGAA    500

BSNT_03816___    501 GCCCACTGACTACTTAATCCCTGATAAAGTGAAGAAGTATGTAGAGGAGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25640___yq    501 GCCCACTGACTACTTAATCCCTGATAAAGTGAAGAAGTATGTAGAGGAGA    550

BSNT_03816___    551 ATGGTTTATATGAATCGTGA    570
                     ||||||||||||||||||||
BSU25640___yq    551 ATGGTTTATATGAATCGTGA    570


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.