Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03815 and BSU25630

See Amino acid alignment / Visit BSNT_03815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence dna-align/BSNT_03815___yqeK.1.22522.seq
#    -bsequence dna-align/BSU25630___yqeK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03815___yqeK-BSU25630___yqeK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03815___yqeK-BSU25630___yqeK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03815___yqeK
# 2: BSU25630___yqeK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity:     556/561 (99.1%)
# Similarity:   556/561 (99.1%)
# Gaps:           0/561 ( 0.0%)
# Score: 2760.0
# 
#
#=======================================

BSNT_03815___      1 ATGAATCGTGAGGAGGCACTTGCATGCGTGAAGCAGCAATTGACCGAACA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq      1 ATGAATCGTGAGGAGGCACTTGCATGCGTGAAGCAGCAATTGACCGAACA     50

BSNT_03815___     51 CCGATATATCCATACGGTTGGCGTGATGAACACGGCGATCGAACTTGCGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq     51 CCGATATATCCATACGGTTGGCGTGATGAACACGGCGATCGAACTTGCGG    100

BSNT_03815___    101 AGCGTTTTGGAGCCGATTCTAAAAAAGCGGAAACAGCGGCAATCTTTCAT    150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU25630___yq    101 AGCGTTTTGGAGCCGATTCTAAAAAAGCGGAAATAGCGGCAATCTTTCAT    150

BSNT_03815___    151 GATTACGCCAAATTCCGCCCGAAAGAAGAAATGAAACAAATTATTGCGCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq    151 GATTACGCCAAATTCCGCCCGAAAGAAGAAATGAAACAAATTATTGCGCG    200

BSNT_03815___    201 AGAAAAAATGCCTGCGCATTTATTGGATCATAATCCGGAGCTCTGGCACG    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq    201 TGAAAAAATGCCTGCGCATTTATTGGATCATAATCCGGAGCTCTGGCACG    250

BSNT_03815___    251 CTCCGGTCGGCGCTTATTTGGTCCAAAGAGAGGCAGGGGTTCAAGATGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq    251 CTCCGGTCGGCGCTTATTTGGTCCAAAGAGAGGCAGGGGTTCAAGATGAA    300

BSNT_03815___    301 GACATTCTTGACGCCATTAGGTATCATACCTCAGGGCGCCCCGGCATGAC    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU25630___yq    301 GACATTCTTGACGCCATTAGGTATCATACCTCAGGCCGCCCCGGCATGAC    350

BSNT_03815___    351 ACTTTTAGAAAAAGTCATTTACGTTGCCGATTACATTGAGCCAAATCGGG    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU25630___yq    351 ACTTTTAGAAAAAGTCATTTACGTTGCCGATTACATTGAGCCAAACCGGG    400

BSNT_03815___    401 CATTTCCCGGTGTCGATGAGGTGCGTAAGCTTGCTGAGACAGATTTGAAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq    401 CATTTCCCGGTGTCGATGAGGTGCGTAAGCTTGCTGAGACAGATTTGAAT    450

BSNT_03815___    451 CAAGCGCTGATTCAGTCCATTAAAAATACAATGGTTTTTCTTATGAAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25630___yq    451 CAAGCGCTGATTCAGTCCATTAAAAATACAATGGTTTTTCTTATGAAAAA    500

BSNT_03815___    501 AAATCAACCGGTTTTTCCAGACACATTTTTAACATATAACTGGCTTGTGT    550
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU25630___yq    501 AAATCAACCGGTTTTTCCAGACACATTTTTAACGTATAACTGGCTTGTGT    550

BSNT_03815___    551 CTGGCAGCTGA    561
                     |||||||||||
BSU25630___yq    551 CTGGCAGCTGA    561


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