Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03799 and BSU25520

See Amino acid alignment / Visit BSNT_03799 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence dna-align/BSNT_03799___yqxA.1.22522.seq
#    -bsequence dna-align/BSU25520___yqxA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03799___yqxA-BSU25520___yqxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03799___yqxA-BSU25520___yqxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03799___yqxA
# 2: BSU25520___yqxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     332/339 (97.9%)
# Similarity:   332/339 (97.9%)
# Gaps:           0/339 ( 0.0%)
# Score: 1632.0
# 
#
#=======================================

BSNT_03799___      1 TTGATTGCATACTTTGGAAAATACTTACTGCTTGTCACGATCATGTTTTT     50
                     ||||||||||||||||||||.|.|||||||||||||||||||||||||||
BSU25520___yq      1 TTGATTGCATACTTTGGAAAGTGCTTACTGCTTGTCACGATCATGTTTTT     50

BSNT_03799___     51 AGGCGTTCTGTTCGGCATGCAGCAGGCAAACAACGGGATGCTGAGTATGA    100
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU25520___yq     51 AGGCGTTCTGTTCGGCATGCAGCAGGCAAACCACGGGATGCTGAGTATGA    100

BSNT_03799___    101 AAGGCTATCATGACCCTTCACTGAGGGGGGCGTTTACGCTCACCGACGGA    150
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU25520___yq    101 AAGGCTATCATGACCCTTCACTGAAGGGGGCGTTTACGCTCACCGACGGA    150

BSNT_03799___    151 AAAGATAATGAAAAAGAAGCCTCAATCCTAGGAGAAACAGTCACGGCAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25520___yq    151 AAAGATAATGAAAAAGAAGCCTCAATCCTAGGAGAAACAGTCACGGCAAA    200

BSNT_03799___    201 AGATTTAGAAGAAAAACAAAAAGAGCTGGAAAAGGTGGAGACATTCAATA    250
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU25520___yq    201 AGATTTAGTAGAAAAACAAAAAGAGCTGGAAAAGGTGGAGACATTCAATA    250

BSNT_03799___    251 TGTTTTCAAAAGCCGGACAAGCGCTTTCGAACACCGTAACCAATACTGCC    300
                     |||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU25520___yq    251 TGTTTTCAAAAGCCGGAAAAGCGCTTTCGGACACCGTAACCAATACTGCC    300

BSNT_03799___    301 CAGTCAATGTATGAATGGATACGGGATATGAATCAATAA    339
                     |||||||||||||||||||||||||||||||||||||||
BSU25520___yq    301 CAGTCAATGTATGAATGGATACGGGATATGAATCAATAA    339


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