Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_03795 and BSU25490

See Amino acid alignment / Visit BSNT_03795 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence dna-align/BSNT_03795___hrcA.1.22522.seq
#    -bsequence dna-align/BSU25490___hrcA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03795___hrcA-BSU25490___hrcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03795___hrcA-BSU25490___hrcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03795___hrcA
# 2: BSU25490___hrcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1032
# Identity:    1028/1032 (99.6%)
# Similarity:  1028/1032 (99.6%)
# Gaps:           0/1032 ( 0.0%)
# Score: 5124.0
# 
#
#=======================================

BSNT_03795___      1 ATGTTAACAAATCGTCAGCTGCTGATCCTTCAGGTTATAATCAACGATTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr      1 ATGTTAACAAATCGTCAGCTGCTGATCCTTCAGGTTATAATCAACGATTT     50

BSNT_03795___     51 TATTAAATCGGCACAGCCGGTGGGATCAAGAACTCTTTCGAAAAAAGATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr     51 TATTAAATCGGCACAGCCGGTGGGATCAAGAACTCTTTCGAAAAAAGATG    100

BSNT_03795___    101 AAATCACATTTAGCTCTGCAACAATAAGAAACGAGATGGCTGACTTGGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    101 AAATCACATTTAGCTCTGCAACAATAAGAAACGAGATGGCTGACTTGGAG    150

BSNT_03795___    151 GAATTGGGCTTTATTGAAAAAACCCATTCATCCTCAGGACGTGTTCCGTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    151 GAATTGGGCTTTATTGAAAAAACCCATTCATCCTCAGGACGTGTTCCGTC    200

BSNT_03795___    201 AGAAAAAGGGTATCGGTACTATGTTGACCATTTGCTGTCACCCGTCAAAC    250
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU25490___hr    201 AGAAAAAGGGTATCGGTACTATGTTGACCATTTGCTGTCACCCGTCAAAT    250

BSNT_03795___    251 TGACGAAAAGCGACCTGGACCAAATCCACTCGATCTTCAAAGAGAAAATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    251 TGACGAAAAGCGACCTGGACCAAATCCACTCGATCTTCAAAGAGAAAATT    300

BSNT_03795___    301 TTCGAGCTGGAGAAGACAGTTCAAAAATCAGCGCAAATTTTGTCCGATCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    301 TTCGAGCTGGAGAAGACAGTTCAAAAATCAGCGCAAATTTTGTCCGATCT    350

BSNT_03795___    351 GACGAATTACACATCCATCGTACTCGGGCCGAAGCTGAGTGAGAATTACC    400
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU25490___hr    351 GACGAATTACACATCCATCGTACTCGGGCCGAAGTTGAGTGAGAATTACC    400

BSNT_03795___    401 TTAAACAGATTCAAATCATTCCGATTCAGCCTGATATGGCGGTAGCGATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    401 TTAAACAGATTCAAATCATTCCGATTCAGCCTGATATGGCGGTAGCGATT    450

BSNT_03795___    451 CTCGTTACCAATACGGGGCATGTGGAAAACAAAACGATTAACTTTCCGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    451 CTCGTTACCAATACGGGGCATGTGGAAAACAAAACGATTAACTTTCCGAC    500

BSNT_03795___    501 CAAAATGGATCTGTCTGATATTGAAAAACTGGTAAATATACTGAACGACC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    501 CAAAATGGATCTGTCTGATATTGAAAAACTGGTAAATATACTGAACGACC    550

BSNT_03795___    551 GTTTAAGCGGCGTTCCAATGGATGAACTGAATGAGCGCATATTTAAAGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    551 GTTTAAGCGGCGTTCCAATGGATGAACTGAATGAGCGCATATTTAAAGAA    600

BSNT_03795___    601 GTTGTCATGTACCTAAGACAGCACATTAAAAACTATGACAATATACTCGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    601 GTTGTCATGTACCTAAGACAGCACATTAAAAACTATGACAATATACTCGA    650

BSNT_03795___    651 CGCGCTTCGTTCAACCTTTCATTCCACAAATCACATTGAAAAGTTGTTTT    700
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU25490___hr    651 CGCGCTTCGTTCAACCTTTCATTCCACAAATCACGTTGAAAAGTTGTTTT    700

BSNT_03795___    701 TTGGCGGGAAAATCAATATGCTGAACCAGCCTGAGTTCCATGATATCACC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    701 TTGGCGGGAAAATCAATATGCTGAACCAGCCTGAGTTCCATGATATCACC    750

BSNT_03795___    751 CGAGTTCGGTCGCTGCTTTCATTAATTGAGAAAGAACAGGATGTTTTAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    751 CGAGTTCGGTCGCTGCTTTCATTAATTGAGAAAGAACAGGATGTTTTAAA    800

BSNT_03795___    801 GCTGGTTCAATCCCCGCGCACGGGAATTTCGATTAAAATCGGAAAAGAAA    850
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU25490___hr    801 GCTGGTTCAATCCCCGCACACGGGAATTTCGATTAAAATCGGAAAAGAAA    850

BSNT_03795___    851 ACGACTATGAAGAGATGGAAAATTGCAGTCTGATTACGGCTTCTTATTCC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    851 ACGACTATGAAGAGATGGAAAATTGCAGTCTGATTACGGCTTCTTATTCC    900

BSNT_03795___    901 GTAGACCAGAAGCAGATCGGCTCAATTGCGATTATCGGCCCGACCCGCAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    901 GTAGACCAGAAGCAGATCGGCTCAATTGCGATTATCGGCCCGACCCGCAT    950

BSNT_03795___    951 GAATTATTCCAGGGTTGTCAGCCTGCTTCAGCATGTGACTTCGGACTTGT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25490___hr    951 GAATTATTCCAGGGTTGTCAGCCTGCTTCAGCATGTGACTTCGGACTTGT   1000

BSNT_03795___   1001 CAAAAGCATTAACAAGTCTGTATGATGAATAA   1032
                     ||||||||||||||||||||||||||||||||
BSU25490___hr   1001 CAAAAGCATTAACAAGTCTGTATGATGAATAA   1032


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03795 and BSU25490

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
