Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03772 and BSU25300
See
Amino acid alignment /
Visit
BSNT_03772 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_03772___cdd.1.22522.seq
# -bsequence dna-align/BSU25300___cdd.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03772___cdd-BSU25300___cdd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03772___cdd-BSU25300___cdd.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03772___cdd
# 2: BSU25300___cdd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 404/411 (98.3%)
# Similarity: 404/411 (98.3%)
# Gaps: 0/411 ( 0.0%)
# Score: 1992.0
#
#
#=======================================
BSNT_03772___ 1 ATGAACAGACAAGAATTAATAACAGAAGCTTTAAAAGCGCGTGATATGGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25300___cd 1 ATGAACAGACAAGAATTAATAACAGAAGCTTTAAAAGCGCGTGATATGGC 50
BSNT_03772___ 51 ATATACGCCGTATTCCAAATTCCAAGTAGGAGCCGCTCTTCTTACCAAGG 100
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU25300___cd 51 ATATGCGCCGTATTCCAAATTCCAAGTAGGAGCCGCTCTTCTTACCAAGG 100
BSNT_03772___ 101 ATGGAAAAGTGTACAGAGGCTGCAACATTGAGAACGCGGCATACAGCATG 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU25300___cd 101 ATGGAAAAGTGTACAGAGGCTGCAATATTGAGAACGCGGCATACAGCATG 150
BSNT_03772___ 151 TGCAATTGCGCCGAGCGTACTGCTTTATTTAAAGCTGTTTCTGAAGGGGA 200
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU25300___cd 151 TGCAATTGCGCCGAGCGTACCGCTTTATTTAAAGCTGTTTCTGAAGGGGA 200
BSNT_03772___ 201 TACAGAGTTTCAGATGCTGGCCGTTGCGGCTGACACCCCTGGACCGGTAT 250
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU25300___cd 201 TACAGAGTTTCAGATGCTGGCCGTTGCGGCTGACACCCCTGGACCAGTAT 250
BSNT_03772___ 251 CTCCGTGCGGAGCCTGCCGCCAGGTGATTTCTGAGCTTTGCACAAAAGAC 300
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU25300___cd 251 CTCCGTGCGGAGCCTGCCGACAGGTGATTTCTGAGCTTTGCACAAAAGAC 300
BSNT_03772___ 301 GTTATTGTCGTACTAACTAATTTACAAGGACAAATAAAAGAAATGACTGT 350
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU25300___cd 301 GTTATTGTCGTACTGACTAATTTACAAGGACAAATAAAAGAAATGACTGT 350
BSNT_03772___ 351 GGAAGATTTATTGCCAGGCGCATTTTCATCGGAGGATTTACATGACGAAC 400
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU25300___cd 351 GGAAGAATTATTGCCAGGCGCATTTTCATCGGAGGATTTACATGACGAAC 400
BSNT_03772___ 401 GAAAGCTTTAA 411
|||||||||||
BSU25300___cd 401 GAAAGCTTTAA 411
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.