Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03769 and BSU25280

See Amino acid alignment / Visit BSNT_03769 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:48
# Commandline: needle
#    -asequence dna-align/BSNT_03769___recO.1.22522.seq
#    -bsequence dna-align/BSU25280___recO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03769___recO-BSU25280___recO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03769___recO-BSU25280___recO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03769___recO
# 2: BSU25280___recO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     759/768 (98.8%)
# Similarity:   759/768 (98.8%)
# Gaps:           0/768 ( 0.0%)
# Score: 3759.0
# 
#
#=======================================

BSNT_03769___      1 ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGA     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU25280___re      1 ATGCTGACAAAATGTGAAGGGATCGTTCTTCGCACAAATGATTACGGAGA     50

BSNT_03769___     51 GACGAATAAAATCGTAACTTTACTGACAAGAGAACACGGAAAAATAGGTG    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU25280___re     51 GACGAATAAAATCGTAACATTACTGACAAGAGAACACGGAAAAATAGGTG    100

BSNT_03769___    101 TTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    101 TTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGC    150

BSNT_03769___    151 CAGCCCTTTTTGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    151 CAGCCCTTTTTGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGG    200

BSNT_03769___    201 AACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGCATCAGGGAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    201 AACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGCATCAGGGAAG    250

BSNT_03769___    251 ACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGA    300
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU25280___re    251 ACTTGTTTTTAACAGCATATGCTGCCTATGTTGCTGAGTTAGTCGACAGA    300

BSNT_03769___    301 GGCACAGAAGAAAAAAAGCCAAATCCTTATTTATTTGAATTCATATTAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    301 GGCACAGAAGAAAAAAAGCCAAATCCTTATTTATTTGAATTCATATTAGA    350

BSNT_03769___    351 ATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA    400
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU25280___re    351 ATCATTAAAACAGTTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA    400

BSNT_03769___    401 TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTGAAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    401 TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTGAAT    450

BSNT_03769___    451 CATTGTGTACATTGTAAGAGCCAAGACGGAACCTTTCATTTCTCTGTTCG    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU25280___re    451 CATTGTGTACATTGTAAAAGCCAAGACGGAACCTTTCATTTCTCTGTTCG    500

BSNT_03769___    501 TGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    501 TGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGA    550

BSNT_03769___    551 TACCGCTCAAACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTT    600
                     |||||.|.||||||||||||||||||||||||||.|||||||||||||||
BSU25280___re    551 TACCGATTAAACCGCAAACGGCAAGGCTGTTAAGGCTCTTTTACTATTTT    600

BSNT_03769___    601 GATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAACAAAAGCTGA    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU25280___re    601 GATCTGTCGAGACTCGGCAATGTGTCCTTAAAAGAGGAAACAAAAGCTGA    650

BSNT_03769___    651 ATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    651 ATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATT    700

BSNT_03769___    701 TAAAATCAAAGCGCTTTTTAGATCAAATGGAAAGCATGAAACATCTTATG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25280___re    701 TAAAATCAAAGCGCTTTTTAGATCAAATGGAAAGCATGAAACATCTTATG    750

BSNT_03769___    751 GGTGAAAACAAAAGTTGA    768
                     ||||||||||||||||||
BSU25280___re    751 GGTGAAAACAAAAGTTGA    768


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.