Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03751 and BSU25160

See Amino acid alignment / Visit BSNT_03751 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_03751___ispH.1.22522.seq
#    -bsequence dna-align/BSU25160___yqfP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03751___ispH-BSU25160___yqfP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03751___ispH-BSU25160___yqfP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03751___ispH
# 2: BSU25160___yqfP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity:     940/945 (99.5%)
# Similarity:   940/945 (99.5%)
# Gaps:           0/945 ( 0.0%)
# Score: 4680.0
# 
#
#=======================================

BSNT_03751___      1 ATGGACGTAATTAAAATTTCACCGCGCGGCTATTGCTATGGTGTTGTTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq      1 ATGGACGTAATTAAAATTTCACCGCGCGGCTATTGCTATGGTGTTGTTGA     50

BSNT_03751___     51 TGCTATGGTCATTGCCAAAAATGCGTCACTAGATAAAAGCTTGCCAAGAC    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU25160___yq     51 TGCTATGGTCATTGCCAAAAATGCGTCGCTAGATAAAAGCTTGCCAAGAC    100

BSNT_03751___    101 CCATCTATATACTCGGGATGATTGTTCATAATAAACACGTCACTGATGCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    101 CCATCTATATACTCGGGATGATTGTTCATAATAAACACGTCACTGATGCG    150

BSNT_03751___    151 TTTGAAGAGGAAGGGATTTTTACATTGGACGGCTCTAACCGTCTGGACAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    151 TTTGAAGAGGAAGGGATTTTTACATTGGACGGCTCTAACCGTCTGGACAT    200

BSNT_03751___    201 CTTAAAGCAGGTTGACAAAGGAACTGTCATTTTCACTGCGCACGGTGTTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    201 CTTAAAGCAGGTTGACAAAGGAACTGTCATTTTCACTGCGCACGGTGTTT    250

BSNT_03751___    251 CTCCCGAAGTCAGAAGAATCGCAGAAGAAAAAGGGTTAGTCGCAATTGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    251 CTCCCGAAGTCAGAAGAATCGCAGAAGAAAAAGGGTTAGTCGCAATTGAT    300

BSNT_03751___    301 GCTACATGTCCGGATGTGACGAAAACTCATAATCTAATCTTAGAGATGAA    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU25160___yq    301 GCTACATGTCCGGATGTGACAAAAACTCATAATCTAATCTTAGAGATGAA    350

BSNT_03751___    351 AGAAAAAGGATATCACGTGATCTATATCGGCAAAAAAGGGCATCCAGAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    351 AGAAAAAGGATATCACGTGATCTATATCGGCAAAAAAGGGCATCCAGAGC    400

BSNT_03751___    401 CTGAGGGAGCCGTTGGCGTAGCGCCGGAGATCGTTCACTTAGTCGAAACA    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU25160___yq    401 CTGAGGGAGCCGTTGGCGTAGCGCCGGAGATCGTTCACTTAGTTGAAACA    450

BSNT_03751___    451 GAAGAAGATGTAAAGAACCTTGATATCCAAGCAGAGAAGTTAATCGTGAC    500
                     ||||||||||||||||||||||||||||||.|.|||||||||||||||||
BSU25160___yq    451 GAAGAAGATGTAAAGAACCTTGATATCCAATCTGAGAAGTTAATCGTGAC    500

BSNT_03751___    501 GAATCAAACAACAATGTCTCAATGGGATGTTCACGACATTATGGAGCTTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    501 GAATCAAACAACAATGTCTCAATGGGATGTTCACGACATTATGGAGCTTG    550

BSNT_03751___    551 TCAAAGAAAAATATCCTCATGTCGAATATCACCAAGAGATTTGCCTCGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    551 TCAAAGAAAAATATCCTCATGTCGAATATCACCAAGAGATTTGCCTCGCT    600

BSNT_03751___    601 ACTCAAGTGCGGCAGGAAGCTGTATCAGAGCAGGCAAAAAAAGCGGACTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    601 ACTCAAGTGCGGCAGGAAGCTGTATCAGAGCAGGCAAAAAAAGCGGACTT    650

BSNT_03751___    651 AACAATCGTTGTCGGAGACCCGAAAAGCAACAATTCAAATAGGCTTGCTC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    651 AACAATCGTTGTCGGAGACCCGAAAAGCAACAATTCAAATAGGCTTGCTC    700

BSNT_03751___    701 AAGTGTCAGAGGAAATAGCCGGGACAAAAGCATACCGGATCGGCGACTTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    701 AAGTGTCAGAGGAAATAGCCGGGACAAAAGCATACCGGATCGGCGACTTA    750

BSNT_03751___    751 AGCGAATTGAAGCTCGAATGGCTGAAAGGCGTTAATACCGTTGCAGTTAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    751 AGCGAATTGAAGCTCGAATGGCTGAAAGGCGTTAATACCGTTGCAGTTAC    800

BSNT_03751___    801 AGCGGGAGCTTCAACACCGACGCCGATCACAAAAGAAGTCATTCGCTTTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    801 AGCGGGAGCTTCAACACCGACGCCGATCACAAAAGAAGTCATTCGCTTTT    850

BSNT_03751___    851 TAGAGCAGTTTGATCACGAAGATCCATCAACTTGGACAACTGAACATAAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    851 TAGAGCAGTTTGATCACGAAGATCCATCAACTTGGACAACTGAACATAAT    900

BSNT_03751___    901 ATACCGCTCAAAAAAATACTTCCAAAAGTAAAAGCAAAAAACTGA    945
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU25160___yq    901 ATACCGCTCAAAAAAATACTTCCAAAAGTAAAAGCAAAAAACTGA    945


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03751 and BSU25160

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
