Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03745 and BSU25120

See Amino acid alignment / Visit BSNT_03745 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_03745___yqfT.1.22522.seq
#    -bsequence dna-align/BSU25120___yqfT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03745___yqfT-BSU25120___yqfT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03745___yqfT-BSU25120___yqfT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03745___yqfT
# 2: BSU25120___yqfT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     253/255 (99.2%)
# Similarity:   253/255 (99.2%)
# Gaps:           0/255 ( 0.0%)
# Score: 1257.0
# 
#
#=======================================

BSNT_03745___      1 ATGATTTTATTTCAAAGAATTATTTTACAGCGGCTTAATCAGGCTACTGC     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU25120___yq      1 ATGATTTTATTTCAAAGAATTATTTTGCAGCGGCTTAATCAGGCTACTGC     50

BSNT_03745___     51 TGATGATTTGCTGAAGTACTCAAAACAATACGGAATCAGCTTAACAAGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25120___yq     51 TGATGATTTGCTGAAGTACTCAAAACAATACGGAATCAGCTTAACAAGAT    100

BSNT_03745___    101 CGCAGGCAGTTGAAGTAGCGAACCTGTTATACGGGAAAAATGTAAACATC    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU25120___yq    101 CGCAGGCCGTTGAAGTAGCGAACCTGTTATACGGGAAAAATGTAAACATC    150

BSNT_03745___    151 TTTAATGAGAGTGAACGAATGCGGCTGCTGAAACAAGTAGAGACGATTAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25120___yq    151 TTTAATGAGAGTGAACGAATGCGGCTGCTGAAACAAGTAGAGACGATTAC    200

BSNT_03745___    201 ATCGAAAGAAACAGCTCAAACAGTTAATGAACTATTCAAACAATTTACAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25120___yq    201 ATCGAAAGAAACAGCTCAAACAGTTAATGAACTATTCAAACAATTTACAA    250

BSNT_03745___    251 GCTAA    255
                     |||||
BSU25120___yq    251 GCTAA    255


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.