Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03744 and BSU25110

See Amino acid alignment / Visit BSNT_03744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_03744___yqfU.1.22522.seq
#    -bsequence dna-align/BSU25110___yqfU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03744___yqfU-BSU25110___yqfU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03744___yqfU-BSU25110___yqfU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03744___yqfU
# 2: BSU25110___yqfU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity:     875/882 (99.2%)
# Similarity:   875/882 (99.2%)
# Gaps:           0/882 ( 0.0%)
# Score: 4347.0
# 
#
#=======================================

BSNT_03744___      1 ATGACCCCAACAAAACAACATAAGAAAGAAACATTTACCCATTTTATTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq      1 ATGACCCCAACAAAACAACATAAGAAAGAAACATTTACCCATTTTATTTT     50

BSNT_03744___     51 CAGGGTCTTTATGATTCTGGTAGGAGCTGCATCTGCGGCTGTAAGTATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq     51 CAGGGTCTTTATGATTCTGGTAGGAGCTGCATCTGCGGCTGTAAGTATTG    100

BSNT_03744___    101 AATTATTTTTAATCCCCAATGATTTTATTGATGGCGGGATTATCGGTGTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    101 AATTATTTTTAATCCCCAATGATTTTATTGATGGCGGGATTATCGGTGTA    150

BSNT_03744___    151 TCACTTATTTTAGACCACCTCTTTATGTCAAACCCCTTTCTCAATTTCGC    200
                     ||.||||||||||||||||||||||||||||||||||||||.||||||||
BSU25110___yq    151 TCTCTTATTTTAGACCACCTCTTTATGTCAAACCCCTTTCTGAATTTCGC    200

BSNT_03744___    201 TTTATTCGTTGTCATATTAAATATTCCTTTTATGATCTTCGGATATAAAT    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    201 TTTTTTCGTTGTCATATTAAATATTCCTTTTATGATCTTCGGATATAAAT    250

BSNT_03744___    251 ATATCGGTAAGACCTTTCTAGTCTCTACGTTTATAGGGATTGTCGGACTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU25110___yq    251 ATATCGGTAAGACCTTTCTAGTCTCTACGTTTATAGGGATTGTCGGGCTT    300

BSNT_03744___    301 GCCGTTATTGAATCCTCACTTCACCATGTAGAAGCCATTACAACCCAGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    301 GCCGTTATTGAATCCTCACTTCACCATGTAGAAGCCATTACAACCCAGCC    350

BSNT_03744___    351 TATTTTGGCTACTGTGTTCGGAGGTCTTTTACTCGGCTTTGGCGTCGGGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    351 TATTTTGGCTACTGTGTTCGGAGGTCTTTTACTCGGCTTTGGCGTCGGGC    400

BSNT_03744___    401 TTGTTATTCGAAACGGAGGTTCAATGGATGGTACAGAAATTCTCGGTATT    450
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU25110___yq    401 TTGTTATTCGAAATGGAGGTTCAATGGATGGTACAGAAATTCTCGGTATT    450

BSNT_03744___    451 TTGCTGACCAAAAAACTCCCGTTTTCTGTAGGTGAGTTCGTTATGTTCAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    451 TTGCTGACCAAAAAACTCCCGTTTTCTGTAGGTGAGTTCGTTATGTTCAT    500

BSNT_03744___    501 CAATGTGTTCATTTTCATTTGGGCAGTTTTTGTGTTCGGTCCTGAGCAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    501 CAATGTGTTCATTTTCATTTGGGCAGTTTTTGTGTTCGGTCCTGAGCAAG    550

BSNT_03744___    551 CGATGTACTCATTCATGACTTATTATATTGCGATGAAAACGATTGATGCT    600
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU25110___yq    551 CGATGTACTCATTCATGACTTATTATATTGCGATGAAAACGATTGATGCC    600

BSNT_03744___    601 GTGATCCAAGGGCTTGATGAAACAAAAGCTGTCATTATTGTGTCTGAGCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    601 GTGATCCAAGGGCTTGATGAAACAAAAGCTGTCATTATTGTGTCTGAGCA    650

BSNT_03744___    651 GTATGATGAGATTTCCGACGCGATTTTGCACCGTCTCGGTCGGGGCACAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    651 GTATGATGAGATTTCCGACGCGATTTTGCACCGTCTCGGTCGGGGCACAA    700

BSNT_03744___    701 CGAAGCTGAAGGGGAAAGGCGGATATACGGACGAAGAAAAAGACGTAATT    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU25110___yq    701 CGAAGCTGAAGGGGAAAGGCGGGTATACGGACGAAGAAAAAGACGTAATT    750

BSNT_03744___    751 TACGCGGTTGTCACAAGGCTGGAAGTGACAAAGCTCAAATCGATCGTGTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    751 TACGCGGTTGTCACAAGGCTGGAAGTGACAAAGCTCAAATCGATCGTGTT    800

BSNT_03744___    801 TGAAGTTGATCAAAATGCATTCATAACAATTATGAATACTCATGAAACGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25110___yq    801 TGAAGTTGATCAAAATGCATTCATAACAATTATGAATACTCATGAAACGA    850

BSNT_03744___    851 GAGGCGGAAAATTCAAAAACGCAATCCACTAG    882
                     ||||||||||||||||||||||||||||||||
BSU25110___yq    851 GAGGCGGAAAATTCAAAAACGCAATCCACTAG    882


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