Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03740 and BSU25080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_03740___yqfX.1.22522.seq
# -bsequence dna-align/BSU25080___yqfX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03740___yqfX-BSU25080___yqfX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03740___yqfX-BSU25080___yqfX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03740___yqfX
# 2: BSU25080___yqfX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity: 386/477 (80.9%)
# Similarity: 386/477 (80.9%)
# Gaps: 87/477 (18.2%)
# Score: 1914.0
#
#
#=======================================
BSNT_03740___ 1 TTGACATTAACAGAAAAGTTTAGCAAACATGAATCAGGCAAAATGGATCA 50
BSU25080___yq 0 -------------------------------------------------- 0
BSNT_03740___ 51 AACTATAAAAGCTCCTTTAATAAAACAGAAGGGGGAATTGAAGGTGGCAA 100
|||||||||||||
BSU25080___yq 1 -------------------------------------TTGAAGGTGGCAA 13
BSNT_03740___ 101 ACGATTACGAAAAGCGTGATAACAACAGTTACTATGTTGATCATGGATCT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25080___yq 14 ACGATTACGAAAAGCGTGATAACAACAGTTACTATGTTGATCATGGATCT 63
BSNT_03740___ 151 GAAGGGACAAATATTACCCGCGACAATGACGGTTTTTTTGAGGAAACAGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25080___yq 64 GAAGGGACAAATATTACCCGCGACAATGACGGTTTTTTTGAGGAAACAGC 113
BSNT_03740___ 201 TGCTGAAATCGCAGAGCCTTATCGTGCTGCTGACCGCAGCAATGACCAAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25080___yq 114 TGCTGAAATCGCAGAGCCTTATCGTGCTGCTGACCGCAGCAATGACCAAG 163
BSNT_03740___ 251 ACAATGATCGCAGCGACGGCAATGTCAATGAAGGACGGGGAATAGGATAT 300
|||||||||||||||.||||||||||||||||||||||||||||||.||.
BSU25080___yq 164 ACAATGATCGCAGCGGCGGCAATGTCAATGAAGGACGGGGAATAGGGTAC 213
BSNT_03740___ 301 ATCGCTTTAGCCTTGTCCATCATTTCATTGTTTGTACTGCCTGTTTTATT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25080___yq 214 ATCGCTTTAGCCTTGTCCATCATTTCATTGTTTGTACTGCCTGTTTTATT 263
BSNT_03740___ 351 GGGAGCTGCCGGTATTATTGTCGGCTATATCGCAAGAAGAAGAGGTGCTC 400
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU25080___yq 264 GGGAGCTGCTGGTATTATTGTCGGCTATATCGCAAGAAGAAGAGGTGCTC 313
BSNT_03740___ 401 AAGGCCTTGGAGCCTGGGCAATGGGTATCGGTGTCGTTTCATTAGTGCTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25080___yq 314 AAGGCCTTGGAGCCTGGGCAATGGGTATCGGTGTCGTTTCATTAGTGCTT 363
BSNT_03740___ 451 GGAATATTTATTATTCCATTTTTCTAA 477
|||||||||||||||||||||||||||
BSU25080___yq 364 GGAATATTTATTATTCCATTTTTCTAA 390
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