Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03736 and BSU25040

See Amino acid alignment / Visit BSNT_03736 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence dna-align/BSNT_03736___yqgB.1.22522.seq
#    -bsequence dna-align/BSU25040___yqgB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03736___yqgB-BSU25040___yqgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03736___yqgB-BSU25040___yqgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03736___yqgB
# 2: BSU25040___yqgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 769
# Identity:     751/769 (97.7%)
# Similarity:   751/769 (97.7%)
# Gaps:           8/769 ( 1.0%)
# Score: 3705.0
# 
#
#=======================================

BSNT_03736___      1 GTGAATGTGTTTCAGCTTTTCATTAAAAGTACATACTCTCCCCGTGATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq      1 GTGAATGTGTTTCAGCTTTTCATTAAAAGTACATACTCTCCCCGTGATAT     50

BSNT_03736___     51 TGCAAAAACAAGATTTCAAGGAATCGGAAAAGCGATTCTTTATGTATTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq     51 TGCAAAAACAAGATTTCAAGGAATCGGAAAAGCGATTCTTTATGTATTTT    100

BSNT_03736___    101 TGCTCTCTGTCCTGTTTGCAATCCCTACCGCTTATTATGTAAGTACAGGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    101 TGCTCTCTGTCCTGTTTGCAATCCCTACCGCTTATTATGTAAGTACAGGG    150

BSNT_03736___    151 ACCGTAAAATCAATGAACGGCTTTAAAACTGTTTTAAACAAAGATTTCCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    151 ACCGTAAAATCAATGAACGGCTTTAAAACTGTTTTAAACAAAGATTTCCC    200

BSNT_03736___    201 TGATTTCACAATTTCAAACGGCAAACTTCAAACGGATGAGAAAAAAGCCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    201 TGATTTCACAATTTCAAACGGCAAACTTCAAACGGATGAGAAAAAAGCCA    250

BSNT_03736___    251 CGGAATCTCAAGCAAATGGTTTCGTTATCGTGTTCGATCCGACAGACTCC    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU25040___yq    251 CGGAATCTCAGGCAAATGGTTTCGTTATCGTGTTCGATCCGACAGACTCC    300

BSNT_03736___    301 TATGGCACTGAACAAATTGAAGCAAAGCAAAACGCGATCGGCATCCTTCA    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU25040___yq    301 TATGGCACTGAACAAATTGAAGCAAAGCAAAACGCAATCGGCATCCTTCA    350

BSNT_03736___    351 GAACAAATTTGTTTTGGCCATTGACGGACAAGCCCAAGAAATGTCTTACT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    351 GAACAAATTTGTTTTGGCCATTGACGGACAAGCCCAAGAAATGTCTTACT    400

BSNT_03736___    401 CAATGATGCCATCAGAGTTACAGAAAAAAGATGTCATTGCAGGTTTAAAC    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU25040___yq    401 CAATGATGCCGTCAGAGTTACAGAAAAAAGATGTCATTGCAGGTTTAAAC    450

BSNT_03736___    451 CAAAATAAAGCGATGATTGTAACTGTTCTCTCAGATCTTATTTTTCTCGT    500
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU25040___yq    451 CAAAATAAAGCGATGATTGTAACTGTTCTCTCAGCTCTTATTTTTCTCGT    500

BSNT_03736___    501 AACAGCAGCGGGAAAATTTATTGAAGTATCGTTTTTAGCGCTTATCGGGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    501 AACAGCAGCGGGAAAATTTATTGAAGTATCGTTTTTAGCGCTTATCGGGT    550

BSNT_03736___    551 TAATCATTAAGAATTCTCAGAAAAAACATTTATCCTATCATCAGCTCTGG    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU25040___yq    551 TAATCATTAAGAATTCGCAGAAAAAACATTTATCCTATCATCAGCTCTGG    600

BSNT_03736___    601 AAGCTTTCTGCTTATTCCATCACCCTTTCAACTGTATTCTTTACAATCAT    650
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU25040___yq    601 AAGCTTTCTGCTTATTCCATCACACTTTCAACTGTATTCTTTACAATCAT    650

BSNT_03736___    651 GCGGGCACTAGAAGCAACCGTACCAAGTGAATTTTTGCTGAACTGGTTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    651 GCGGGCACTAGAAGCAACCGTACCAAGTGAATTTTTGCTGAACTGGTTTG    700

BSNT_03736___    701 TCAATTTTGTCATCCTGTTTCTCGTTTTAAAAGAGATTCCGTCCAAAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25040___yq    701 TCAATTTTGTCATCCTGTTTCTCGTTTTAAAAGAGATTCCGTCCAAAAAA    750

BSNT_03736___    751 GCTGCTGTATAA-------    762
                     | |..|..||||       
BSU25040___yq    751 G-TAATTAATAAAAGTTAA    768


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